Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RBM48Q5RL73 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.41■□□□□ 0.7
RBM48Q5RL73 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RBM48Q5RL73 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RBM48Q5RL73 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.41■□□□□ 0.7
RBM48Q5RL73 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RBM48Q5RL73 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RBM48Q5RL73 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RBM48Q5RL73 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.41■□□□□ 0.7
RBM48Q5RL73 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RBM48Q5RL73 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RBM48Q5RL73 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RBM48Q5RL73 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
RBM48Q5RL73 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RBM48Q5RL73 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
RBM48Q5RL73 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RBM48Q5RL73 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RBM48Q5RL73 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RBM48Q5RL73 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.4■□□□□ 0.7
RBM48Q5RL73 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RBM48Q5RL73 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.4■□□□□ 0.7
RBM48Q5RL73 THA1P-201ENST00000590384 1145 ntBASIC19.4■□□□□ 0.7
RBM48Q5RL73 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RBM48Q5RL73 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RBM48Q5RL73 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RBM48Q5RL73 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RBM48Q5RL73 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RBM48Q5RL73 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RBM48Q5RL73 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RBM48Q5RL73 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RBM48Q5RL73 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.4■□□□□ 0.7
RBM48Q5RL73 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RBM48Q5RL73 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RBM48Q5RL73 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
RBM48Q5RL73 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RBM48Q5RL73 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RBM48Q5RL73 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.39■□□□□ 0.69
RBM48Q5RL73 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RBM48Q5RL73 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RBM48Q5RL73 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.39■□□□□ 0.69
RBM48Q5RL73 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RBM48Q5RL73 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RBM48Q5RL73 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RBM48Q5RL73 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RBM48Q5RL73 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.39■□□□□ 0.69
RBM48Q5RL73 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RBM48Q5RL73 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RBM48Q5RL73 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RBM48Q5RL73 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RBM48Q5RL73 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RBM48Q5RL73 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.38■□□□□ 0.69
RBM48Q5RL73 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.38■□□□□ 0.69
RBM48Q5RL73 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.38■□□□□ 0.69
RBM48Q5RL73 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
RBM48Q5RL73 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.38■□□□□ 0.69
RBM48Q5RL73 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RBM48Q5RL73 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RBM48Q5RL73 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RBM48Q5RL73 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RBM48Q5RL73 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RBM48Q5RL73 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.37■□□□□ 0.69
RBM48Q5RL73 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RBM48Q5RL73 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
RBM48Q5RL73 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RBM48Q5RL73 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RBM48Q5RL73 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RBM48Q5RL73 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.37■□□□□ 0.69
RBM48Q5RL73 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.37■□□□□ 0.69
RBM48Q5RL73 AC006128.1-201ENST00000624704 1661 ntBASIC19.37■□□□□ 0.69
RBM48Q5RL73 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RBM48Q5RL73 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RBM48Q5RL73 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RBM48Q5RL73 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RBM48Q5RL73 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.37■□□□□ 0.69
RBM48Q5RL73 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.37■□□□□ 0.69
RBM48Q5RL73 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RBM48Q5RL73 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RBM48Q5RL73 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RBM48Q5RL73 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.37■□□□□ 0.69
RBM48Q5RL73 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RBM48Q5RL73 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RBM48Q5RL73 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RBM48Q5RL73 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.36■□□□□ 0.69
RBM48Q5RL73 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RBM48Q5RL73 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RBM48Q5RL73 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RBM48Q5RL73 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.36■□□□□ 0.69
RBM48Q5RL73 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RBM48Q5RL73 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.36■□□□□ 0.69
RBM48Q5RL73 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.36■□□□□ 0.69
RBM48Q5RL73 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RBM48Q5RL73 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.36■□□□□ 0.69
RBM48Q5RL73 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.36■□□□□ 0.69
RBM48Q5RL73 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RBM48Q5RL73 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RBM48Q5RL73 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RBM48Q5RL73 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RBM48Q5RL73 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
RBM48Q5RL73 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RBM48Q5RL73 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms