Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC026185.1-201ENST00000445748 174 ntBASIC18.17■□□□□ 0.5
EFNB3Q15768 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.17■□□□□ 0.5
EFNB3Q15768 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFNB3Q15768 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFNB3Q15768 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.17■□□□□ 0.5
EFNB3Q15768 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFNB3Q15768 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.17■□□□□ 0.5
EFNB3Q15768 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFNB3Q15768 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFNB3Q15768 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EFNB3Q15768 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
EFNB3Q15768 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFNB3Q15768 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.16■□□□□ 0.5
EFNB3Q15768 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.16■□□□□ 0.5
EFNB3Q15768 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.16■□□□□ 0.5
EFNB3Q15768 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
EFNB3Q15768 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.16■□□□□ 0.5
EFNB3Q15768 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.16■□□□□ 0.5
EFNB3Q15768 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EFNB3Q15768 MFSD11-216ENST00000590393 1141 ntBASIC18.16■□□□□ 0.5
EFNB3Q15768 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.16■□□□□ 0.5
EFNB3Q15768 UBE2DNL-204ENST00000602536 740 ntBASIC18.16■□□□□ 0.5
EFNB3Q15768 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EFNB3Q15768 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.16■□□□□ 0.5
EFNB3Q15768 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFNB3Q15768 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.16■□□□□ 0.5
EFNB3Q15768 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
EFNB3Q15768 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EFNB3Q15768 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.16■□□□□ 0.5
EFNB3Q15768 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
EFNB3Q15768 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFNB3Q15768 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFNB3Q15768 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EFNB3Q15768 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.15■□□□□ 0.5
EFNB3Q15768 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.15■□□□□ 0.5
EFNB3Q15768 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFNB3Q15768 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFNB3Q15768 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFNB3Q15768 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFNB3Q15768 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EFNB3Q15768 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
EFNB3Q15768 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.15■□□□□ 0.5
EFNB3Q15768 MYCNOS-205ENST00000641950 531 ntBASIC18.15■□□□□ 0.5
EFNB3Q15768 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EFNB3Q15768 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFNB3Q15768 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EFNB3Q15768 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EFNB3Q15768 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFNB3Q15768 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.15■□□□□ 0.5
EFNB3Q15768 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFNB3Q15768 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
EFNB3Q15768 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
EFNB3Q15768 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
EFNB3Q15768 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.14■□□□□ 0.49
EFNB3Q15768 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.14■□□□□ 0.49
EFNB3Q15768 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EFNB3Q15768 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EFNB3Q15768 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EFNB3Q15768 AC092053.2-201ENST00000640557 1818 ntBASIC18.14■□□□□ 0.49
EFNB3Q15768 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EFNB3Q15768 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
EFNB3Q15768 C1orf229-201ENST00000623686 2258 ntBASIC18.14■□□□□ 0.49
EFNB3Q15768 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EFNB3Q15768 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EFNB3Q15768 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EFNB3Q15768 CLDN5-201ENST00000403084 2357 ntBASIC18.13■□□□□ 0.49
EFNB3Q15768 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EFNB3Q15768 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
EFNB3Q15768 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EFNB3Q15768 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
EFNB3Q15768 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EFNB3Q15768 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EFNB3Q15768 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
EFNB3Q15768 ID1-201ENST00000376105 1233 ntBASIC18.13■□□□□ 0.49
EFNB3Q15768 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.13■□□□□ 0.49
EFNB3Q15768 SLC7A5P1-201ENST00000568957 537 ntBASIC18.13■□□□□ 0.49
EFNB3Q15768 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EFNB3Q15768 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
EFNB3Q15768 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.13■□□□□ 0.49
EFNB3Q15768 AL117328.2-201ENST00000624617 1940 ntBASIC18.13■□□□□ 0.49
EFNB3Q15768 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EFNB3Q15768 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.13■□□□□ 0.49
EFNB3Q15768 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
EFNB3Q15768 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.13■□□□□ 0.49
EFNB3Q15768 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EFNB3Q15768 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
EFNB3Q15768 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.12■□□□□ 0.49
EFNB3Q15768 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
EFNB3Q15768 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EFNB3Q15768 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
EFNB3Q15768 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
EFNB3Q15768 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EFNB3Q15768 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.12■□□□□ 0.49
EFNB3Q15768 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EFNB3Q15768 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.12■□□□□ 0.49
EFNB3Q15768 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.12■□□□□ 0.49
EFNB3Q15768 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.12■□□□□ 0.49
EFNB3Q15768 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
EFNB3Q15768 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
EFNB3Q15768 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms