Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.1■□□□□ 0.97
SF3A2Q15428 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SF3A2Q15428 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.1■□□□□ 0.97
SF3A2Q15428 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SF3A2Q15428 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SF3A2Q15428 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SF3A2Q15428 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SF3A2Q15428 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.09■□□□□ 0.97
SF3A2Q15428 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SF3A2Q15428 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.09■□□□□ 0.97
SF3A2Q15428 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SF3A2Q15428 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.09■□□□□ 0.97
SF3A2Q15428 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.09■□□□□ 0.97
SF3A2Q15428 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SF3A2Q15428 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SF3A2Q15428 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SF3A2Q15428 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SF3A2Q15428 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.08■□□□□ 0.97
SF3A2Q15428 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SF3A2Q15428 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SF3A2Q15428 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.08■□□□□ 0.97
SF3A2Q15428 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SF3A2Q15428 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.08■□□□□ 0.97
SF3A2Q15428 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SF3A2Q15428 AC008550.1-201ENST00000511500 884 ntBASIC21.08■□□□□ 0.97
SF3A2Q15428 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.08■□□□□ 0.96
SF3A2Q15428 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SF3A2Q15428 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SF3A2Q15428 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SF3A2Q15428 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SF3A2Q15428 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SF3A2Q15428 AC091874.3-201ENST00000512672 1195 ntBASIC21.07■□□□□ 0.96
SF3A2Q15428 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.07■□□□□ 0.96
SF3A2Q15428 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.07■□□□□ 0.96
SF3A2Q15428 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SF3A2Q15428 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.07■□□□□ 0.96
SF3A2Q15428 AC073648.6-201ENST00000641589 218 ntBASIC21.07■□□□□ 0.96
SF3A2Q15428 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SF3A2Q15428 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
SF3A2Q15428 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SF3A2Q15428 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SF3A2Q15428 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.07■□□□□ 0.96
SF3A2Q15428 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SF3A2Q15428 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SF3A2Q15428 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SF3A2Q15428 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.06■□□□□ 0.96
SF3A2Q15428 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.06■□□□□ 0.96
SF3A2Q15428 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.06■□□□□ 0.96
SF3A2Q15428 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.06■□□□□ 0.96
SF3A2Q15428 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.06■□□□□ 0.96
SF3A2Q15428 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SF3A2Q15428 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SF3A2Q15428 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SF3A2Q15428 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SF3A2Q15428 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SF3A2Q15428 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SF3A2Q15428 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.05■□□□□ 0.96
SF3A2Q15428 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SF3A2Q15428 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SF3A2Q15428 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SF3A2Q15428 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.05■□□□□ 0.96
SF3A2Q15428 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SF3A2Q15428 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SF3A2Q15428 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SF3A2Q15428 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SF3A2Q15428 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SF3A2Q15428 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.05■□□□□ 0.96
SF3A2Q15428 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SF3A2Q15428 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SF3A2Q15428 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SF3A2Q15428 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SF3A2Q15428 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SF3A2Q15428 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SF3A2Q15428 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.04■□□□□ 0.96
SF3A2Q15428 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.04■□□□□ 0.96
SF3A2Q15428 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SF3A2Q15428 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
SF3A2Q15428 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SF3A2Q15428 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.04■□□□□ 0.96
SF3A2Q15428 AC026366.1-201ENST00000488803 879 ntBASIC21.04■□□□□ 0.96
SF3A2Q15428 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.04■□□□□ 0.96
SF3A2Q15428 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.04■□□□□ 0.96
SF3A2Q15428 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SF3A2Q15428 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.04■□□□□ 0.96
SF3A2Q15428 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.04■□□□□ 0.96
SF3A2Q15428 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.04■□□□□ 0.96
SF3A2Q15428 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.04■□□□□ 0.96
SF3A2Q15428 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SF3A2Q15428 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SF3A2Q15428 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SF3A2Q15428 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SF3A2Q15428 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.03■□□□□ 0.96
SF3A2Q15428 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
SF3A2Q15428 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SF3A2Q15428 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SF3A2Q15428 MIR1224-201ENST00000408193 85 ntBASIC21.03■□□□□ 0.96
SF3A2Q15428 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SF3A2Q15428 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.03■□□□□ 0.96
SF3A2Q15428 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SF3A2Q15428 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms