Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
EIF3EP60228 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
EIF3EP60228 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.94■■□□□ 1.1
EIF3EP60228 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
EIF3EP60228 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
EIF3EP60228 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.93■■□□□ 1.1
EIF3EP60228 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
EIF3EP60228 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
EIF3EP60228 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.93■■□□□ 1.1
EIF3EP60228 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.93■■□□□ 1.1
EIF3EP60228 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
EIF3EP60228 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.93■■□□□ 1.1
EIF3EP60228 AC008764.7-201ENST00000593779 1081 ntBASIC21.93■■□□□ 1.1
EIF3EP60228 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
EIF3EP60228 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
EIF3EP60228 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
EIF3EP60228 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
EIF3EP60228 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.92■■□□□ 1.1
EIF3EP60228 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.92■■□□□ 1.1
EIF3EP60228 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
EIF3EP60228 AP006587.3-201ENST00000525742 1516 ntBASIC21.92■■□□□ 1.1
EIF3EP60228 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
EIF3EP60228 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.92■■□□□ 1.1
EIF3EP60228 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
EIF3EP60228 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
EIF3EP60228 IGHV3-19-201ENST00000521488 291 ntBASIC21.92■■□□□ 1.1
EIF3EP60228 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.92■■□□□ 1.1
EIF3EP60228 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
EIF3EP60228 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
EIF3EP60228 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.92■■□□□ 1.1
EIF3EP60228 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.92■■□□□ 1.1
EIF3EP60228 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
EIF3EP60228 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
EIF3EP60228 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
EIF3EP60228 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
EIF3EP60228 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
EIF3EP60228 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
EIF3EP60228 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
EIF3EP60228 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
EIF3EP60228 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.91■■□□□ 1.1
EIF3EP60228 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
EIF3EP60228 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
EIF3EP60228 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.91■■□□□ 1.1
EIF3EP60228 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
EIF3EP60228 PBX2P1-201ENST00000493219 1291 ntBASIC21.91■■□□□ 1.1
EIF3EP60228 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.91■■□□□ 1.1
EIF3EP60228 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.91■■□□□ 1.1
EIF3EP60228 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
EIF3EP60228 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
EIF3EP60228 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
EIF3EP60228 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
EIF3EP60228 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
EIF3EP60228 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
EIF3EP60228 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
EIF3EP60228 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
EIF3EP60228 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
EIF3EP60228 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
EIF3EP60228 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.9■■□□□ 1.1
EIF3EP60228 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
EIF3EP60228 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
EIF3EP60228 AL024507.2-201ENST00000606070 2574 ntBASIC21.9■■□□□ 1.1
EIF3EP60228 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.89■■□□□ 1.1
EIF3EP60228 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.89■■□□□ 1.1
EIF3EP60228 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
EIF3EP60228 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
EIF3EP60228 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
EIF3EP60228 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
EIF3EP60228 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
EIF3EP60228 AC099791.1-201ENST00000416440 715 ntBASIC21.89■■□□□ 1.09
EIF3EP60228 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
EIF3EP60228 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
EIF3EP60228 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.89■■□□□ 1.09
EIF3EP60228 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
EIF3EP60228 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.89■■□□□ 1.09
EIF3EP60228 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
EIF3EP60228 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
EIF3EP60228 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
EIF3EP60228 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
EIF3EP60228 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
EIF3EP60228 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.89■■□□□ 1.09
EIF3EP60228 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
EIF3EP60228 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
EIF3EP60228 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
EIF3EP60228 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
EIF3EP60228 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.88■■□□□ 1.09
EIF3EP60228 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
EIF3EP60228 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
EIF3EP60228 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.88■■□□□ 1.09
EIF3EP60228 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
EIF3EP60228 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.88■■□□□ 1.09
EIF3EP60228 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.88■■□□□ 1.09
EIF3EP60228 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.88■■□□□ 1.09
EIF3EP60228 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.88■■□□□ 1.09
EIF3EP60228 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
EIF3EP60228 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
EIF3EP60228 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
EIF3EP60228 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EIF3EP60228 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
EIF3EP60228 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.87■■□□□ 1.09
EIF3EP60228 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms