Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH13P55290 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CDH13P55290 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH13P55290 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CDH13P55290 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH13P55290 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH13P55290 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH13P55290 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDH13P55290 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH13P55290 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CDH13P55290 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH13P55290 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH13P55290 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.77■□□□□ 0.92
CDH13P55290 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH13P55290 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH13P55290 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH13P55290 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH13P55290 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDH13P55290 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CDH13P55290 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH13P55290 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH13P55290 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH13P55290 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CDH13P55290 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH13P55290 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CDH13P55290 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDH13P55290 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH13P55290 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.76■□□□□ 0.91
CDH13P55290 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH13P55290 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CDH13P55290 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.76■□□□□ 0.91
CDH13P55290 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CDH13P55290 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDH13P55290 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH13P55290 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH13P55290 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
CDH13P55290 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH13P55290 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CDH13P55290 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDH13P55290 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.75■□□□□ 0.91
CDH13P55290 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.75■□□□□ 0.91
CDH13P55290 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH13P55290 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CDH13P55290 AL034346.1-201ENST00000568244 1277 ntBASIC20.75■□□□□ 0.91
CDH13P55290 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.75■□□□□ 0.91
CDH13P55290 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH13P55290 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH13P55290 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH13P55290 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH13P55290 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH13P55290 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDH13P55290 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH13P55290 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH13P55290 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH13P55290 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH13P55290 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH13P55290 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH13P55290 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH13P55290 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH13P55290 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.74■□□□□ 0.91
CDH13P55290 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.74■□□□□ 0.91
CDH13P55290 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.74■□□□□ 0.91
CDH13P55290 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH13P55290 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.74■□□□□ 0.91
CDH13P55290 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH13P55290 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH13P55290 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH13P55290 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH13P55290 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH13P55290 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH13P55290 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH13P55290 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CDH13P55290 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH13P55290 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH13P55290 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.73■□□□□ 0.91
CDH13P55290 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH13P55290 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH13P55290 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH13P55290 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH13P55290 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH13P55290 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH13P55290 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH13P55290 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.72■□□□□ 0.91
CDH13P55290 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH13P55290 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH13P55290 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH13P55290 UNC93B3-201ENST00000308076 687 ntBASIC20.72■□□□□ 0.91
CDH13P55290 MIR4767-201ENST00000582827 78 ntBASIC20.72■□□□□ 0.91
CDH13P55290 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CDH13P55290 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH13P55290 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH13P55290 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH13P55290 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.71■□□□□ 0.91
CDH13P55290 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH13P55290 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH13P55290 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH13P55290 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH13P55290 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CDH13P55290 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.71■□□□□ 0.91
CDH13P55290 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms