Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT6CP48668 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT6CP48668 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.58■□□□□ 0.89
KRT6CP48668 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.58■□□□□ 0.89
KRT6CP48668 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.58■□□□□ 0.89
KRT6CP48668 AC233992.3-201ENST00000607491 485 ntBASIC20.58■□□□□ 0.89
KRT6CP48668 AL136162.1-201ENST00000607711 1078 ntBASIC20.58■□□□□ 0.89
KRT6CP48668 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.58■□□□□ 0.89
KRT6CP48668 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT6CP48668 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KRT6CP48668 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
KRT6CP48668 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.58■□□□□ 0.88
KRT6CP48668 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.58■□□□□ 0.88
KRT6CP48668 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.58■□□□□ 0.88
KRT6CP48668 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRT6CP48668 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT6CP48668 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KRT6CP48668 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.57■□□□□ 0.88
KRT6CP48668 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT6CP48668 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
KRT6CP48668 AC024257.2-201ENST00000549699 147 ntBASIC20.57■□□□□ 0.88
KRT6CP48668 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
KRT6CP48668 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT6CP48668 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.56■□□□□ 0.88
KRT6CP48668 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT6CP48668 AC135279.3-201ENST00000610945 1311 ntBASIC20.56■□□□□ 0.88
KRT6CP48668 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
KRT6CP48668 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.56■□□□□ 0.88
KRT6CP48668 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRT6CP48668 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRT6CP48668 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT6CP48668 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
KRT6CP48668 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRT6CP48668 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRT6CP48668 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRT6CP48668 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.56■□□□□ 0.88
KRT6CP48668 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
KRT6CP48668 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.56■□□□□ 0.88
KRT6CP48668 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.56■□□□□ 0.88
KRT6CP48668 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT6CP48668 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT6CP48668 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6CP48668 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
KRT6CP48668 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6CP48668 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6CP48668 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6CP48668 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT6CP48668 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT6CP48668 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT6CP48668 AC126544.1-201ENST00000580842 1059 ntBASIC20.55■□□□□ 0.88
KRT6CP48668 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT6CP48668 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT6CP48668 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6CP48668 AC008406.3-201ENST00000620001 1374 ntBASIC20.55■□□□□ 0.88
KRT6CP48668 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6CP48668 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6CP48668 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6CP48668 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT6CP48668 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT6CP48668 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6CP48668 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT6CP48668 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
KRT6CP48668 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT6CP48668 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.54■□□□□ 0.88
KRT6CP48668 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT6CP48668 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT6CP48668 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT6CP48668 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT6CP48668 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT6CP48668 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT6CP48668 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.53■□□□□ 0.88
KRT6CP48668 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6CP48668 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6CP48668 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
KRT6CP48668 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6CP48668 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6CP48668 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6CP48668 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.53■□□□□ 0.88
KRT6CP48668 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6CP48668 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.53■□□□□ 0.88
KRT6CP48668 AC133561.4-201ENST00000566112 224 ntBASIC20.53■□□□□ 0.88
KRT6CP48668 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6CP48668 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6CP48668 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6CP48668 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6CP48668 AC005229.4-201ENST00000610085 2198 ntBASIC20.53■□□□□ 0.88
KRT6CP48668 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6CP48668 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6CP48668 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6CP48668 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
KRT6CP48668 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6CP48668 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6CP48668 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT6CP48668 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT6CP48668 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT6CP48668 FEM1AP4-201ENST00000443167 1987 ntBASIC20.52■□□□□ 0.88
KRT6CP48668 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT6CP48668 AC003102.1-202ENST00000563394 1796 ntBASIC20.52■□□□□ 0.88
KRT6CP48668 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.52■□□□□ 0.88
KRT6CP48668 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms