Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.65■□□□□ 0.74
ATRXP46100 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.65■□□□□ 0.74
ATRXP46100 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATRXP46100 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATRXP46100 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ATRXP46100 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
ATRXP46100 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.64■□□□□ 0.74
ATRXP46100 AC138907.5-202ENST00000569484 235 ntBASIC19.64■□□□□ 0.74
ATRXP46100 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATRXP46100 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATRXP46100 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATRXP46100 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATRXP46100 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATRXP46100 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.64■□□□□ 0.73
ATRXP46100 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.64■□□□□ 0.73
ATRXP46100 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.64■□□□□ 0.73
ATRXP46100 MIR4785-201ENST00000585005 73 ntBASIC19.64■□□□□ 0.73
ATRXP46100 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATRXP46100 AC079630.1-202ENST00000618127 1840 ntBASIC19.64■□□□□ 0.73
ATRXP46100 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATRXP46100 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.64■□□□□ 0.73
ATRXP46100 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.64■□□□□ 0.73
ATRXP46100 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
ATRXP46100 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATRXP46100 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATRXP46100 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATRXP46100 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.63■□□□□ 0.73
ATRXP46100 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATRXP46100 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATRXP46100 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATRXP46100 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATRXP46100 TSPY7P-201ENST00000431358 1114 ntBASIC19.63■□□□□ 0.73
ATRXP46100 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATRXP46100 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATRXP46100 TSPY15P-201ENST00000457163 923 ntBASIC19.63■□□□□ 0.73
ATRXP46100 AC233702.5-201ENST00000584107 538 ntBASIC19.63■□□□□ 0.73
ATRXP46100 OXCT2P1-201ENST00000447263 1535 ntBASIC19.63■□□□□ 0.73
ATRXP46100 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATRXP46100 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATRXP46100 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ATRXP46100 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATRXP46100 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATRXP46100 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.62■□□□□ 0.73
ATRXP46100 AL049637.2-201ENST00000641778 930 ntBASIC19.62■□□□□ 0.73
ATRXP46100 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATRXP46100 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.62■□□□□ 0.73
ATRXP46100 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATRXP46100 LINC00543-201ENST00000567234 1845 ntBASIC19.62■□□□□ 0.73
ATRXP46100 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATRXP46100 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
ATRXP46100 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ATRXP46100 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ATRXP46100 KRT18P20-201ENST00000548986 1279 ntBASIC19.62■□□□□ 0.73
ATRXP46100 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATRXP46100 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ATRXP46100 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATRXP46100 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRXP46100 DUSP8P4-201ENST00000399538 1761 ntBASIC19.61■□□□□ 0.73
ATRXP46100 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRXP46100 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.61■□□□□ 0.73
ATRXP46100 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRXP46100 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRXP46100 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATRXP46100 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATRXP46100 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRXP46100 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRXP46100 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATRXP46100 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.61■□□□□ 0.73
ATRXP46100 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.61■□□□□ 0.73
ATRXP46100 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRXP46100 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.61■□□□□ 0.73
ATRXP46100 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.61■□□□□ 0.73
ATRXP46100 AL353708.3-201ENST00000610272 989 ntBASIC19.61■□□□□ 0.73
ATRXP46100 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRXP46100 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRXP46100 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATRXP46100 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.6■□□□□ 0.73
ATRXP46100 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.6■□□□□ 0.73
ATRXP46100 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.6■□□□□ 0.73
ATRXP46100 AC006538.3-201ENST00000612495 578 ntBASIC19.6■□□□□ 0.73
ATRXP46100 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.6■□□□□ 0.73
ATRXP46100 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATRXP46100 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATRXP46100 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.6■□□□□ 0.73
ATRXP46100 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.6■□□□□ 0.73
ATRXP46100 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.6■□□□□ 0.73
ATRXP46100 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATRXP46100 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATRXP46100 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.59■□□□□ 0.73
ATRXP46100 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATRXP46100 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATRXP46100 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.59■□□□□ 0.73
ATRXP46100 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATRXP46100 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ATRXP46100 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.59■□□□□ 0.73
ATRXP46100 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
ATRXP46100 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATRXP46100 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.59■□□□□ 0.73
ATRXP46100 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATRXP46100 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms