Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 MIR4767-201ENST00000582827 78 ntBASIC20.31■□□□□ 0.84
BCKDHAP12694 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.31■□□□□ 0.84
BCKDHAP12694 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
BCKDHAP12694 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
BCKDHAP12694 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.31■□□□□ 0.84
BCKDHAP12694 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
BCKDHAP12694 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.3■□□□□ 0.84
BCKDHAP12694 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHAP12694 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
BCKDHAP12694 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHAP12694 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHAP12694 UNC93B3-201ENST00000308076 687 ntBASIC20.3■□□□□ 0.84
BCKDHAP12694 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.3■□□□□ 0.84
BCKDHAP12694 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.3■□□□□ 0.84
BCKDHAP12694 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.3■□□□□ 0.84
BCKDHAP12694 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.3■□□□□ 0.84
BCKDHAP12694 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
BCKDHAP12694 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHAP12694 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHAP12694 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHAP12694 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
BCKDHAP12694 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.3■□□□□ 0.84
BCKDHAP12694 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHAP12694 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHAP12694 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHAP12694 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.3■□□□□ 0.84
BCKDHAP12694 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
BCKDHAP12694 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHAP12694 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.29■□□□□ 0.84
BCKDHAP12694 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
BCKDHAP12694 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BCKDHAP12694 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BCKDHAP12694 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.29■□□□□ 0.84
BCKDHAP12694 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BCKDHAP12694 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BCKDHAP12694 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BCKDHAP12694 AP006587.3-201ENST00000525742 1516 ntBASIC20.29■□□□□ 0.84
BCKDHAP12694 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BCKDHAP12694 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BCKDHAP12694 AC133561.4-201ENST00000566112 224 ntBASIC20.29■□□□□ 0.84
BCKDHAP12694 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
BCKDHAP12694 SMUG1P1-201ENST00000590640 811 ntBASIC20.29■□□□□ 0.84
BCKDHAP12694 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
BCKDHAP12694 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.29■□□□□ 0.84
BCKDHAP12694 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.29■□□□□ 0.84
BCKDHAP12694 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCKDHAP12694 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.28■□□□□ 0.84
BCKDHAP12694 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
BCKDHAP12694 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
BCKDHAP12694 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCKDHAP12694 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BCKDHAP12694 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.28■□□□□ 0.84
BCKDHAP12694 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.28■□□□□ 0.84
BCKDHAP12694 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.28■□□□□ 0.84
BCKDHAP12694 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BCKDHAP12694 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCKDHAP12694 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.28■□□□□ 0.84
BCKDHAP12694 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCKDHAP12694 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
BCKDHAP12694 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.27■□□□□ 0.84
BCKDHAP12694 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCKDHAP12694 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
BCKDHAP12694 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
BCKDHAP12694 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
BCKDHAP12694 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCKDHAP12694 AC024257.2-201ENST00000549699 147 ntBASIC20.27■□□□□ 0.84
BCKDHAP12694 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCKDHAP12694 AC233992.3-201ENST00000607491 485 ntBASIC20.27■□□□□ 0.84
BCKDHAP12694 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.27■□□□□ 0.84
BCKDHAP12694 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
BCKDHAP12694 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
BCKDHAP12694 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.27■□□□□ 0.83
BCKDHAP12694 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
BCKDHAP12694 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BCKDHAP12694 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
BCKDHAP12694 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHAP12694 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHAP12694 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHAP12694 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHAP12694 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHAP12694 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
BCKDHAP12694 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.26■□□□□ 0.83
BCKDHAP12694 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
BCKDHAP12694 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.26■□□□□ 0.83
BCKDHAP12694 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHAP12694 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHAP12694 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
BCKDHAP12694 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.26■□□□□ 0.83
BCKDHAP12694 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
BCKDHAP12694 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHAP12694 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHAP12694 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
BCKDHAP12694 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHAP12694 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHAP12694 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
BCKDHAP12694 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHAP12694 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHAP12694 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
BCKDHAP12694 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHAP12694 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms