Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.71■■□□□ 1.07
COL4A2P08572 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.71■■□□□ 1.07
COL4A2P08572 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.71■■□□□ 1.07
COL4A2P08572 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
COL4A2P08572 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL4A2P08572 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.7■■□□□ 1.06
COL4A2P08572 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL4A2P08572 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.7■■□□□ 1.06
COL4A2P08572 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.7■■□□□ 1.06
COL4A2P08572 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.7■■□□□ 1.06
COL4A2P08572 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.7■■□□□ 1.06
COL4A2P08572 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL4A2P08572 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.7■■□□□ 1.06
COL4A2P08572 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.7■■□□□ 1.06
COL4A2P08572 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL4A2P08572 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL4A2P08572 AC093323.1-202ENST00000635031 2045 ntBASIC21.7■■□□□ 1.06
COL4A2P08572 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL4A2P08572 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.69■■□□□ 1.06
COL4A2P08572 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.69■■□□□ 1.06
COL4A2P08572 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL4A2P08572 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.69■■□□□ 1.06
COL4A2P08572 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.69■■□□□ 1.06
COL4A2P08572 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL4A2P08572 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL4A2P08572 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
COL4A2P08572 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL4A2P08572 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL4A2P08572 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL4A2P08572 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
COL4A2P08572 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL4A2P08572 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL4A2P08572 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL4A2P08572 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.68■■□□□ 1.06
COL4A2P08572 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.68■■□□□ 1.06
COL4A2P08572 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.68■■□□□ 1.06
COL4A2P08572 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.68■■□□□ 1.06
COL4A2P08572 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.68■■□□□ 1.06
COL4A2P08572 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
COL4A2P08572 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.68■■□□□ 1.06
COL4A2P08572 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.68■■□□□ 1.06
COL4A2P08572 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL4A2P08572 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL4A2P08572 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL4A2P08572 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL4A2P08572 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL4A2P08572 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.67■■□□□ 1.06
COL4A2P08572 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.67■■□□□ 1.06
COL4A2P08572 AC243732.1-201ENST00000612648 864 ntBASIC21.67■■□□□ 1.06
COL4A2P08572 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.67■■□□□ 1.06
COL4A2P08572 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL4A2P08572 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.67■■□□□ 1.06
COL4A2P08572 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL4A2P08572 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
COL4A2P08572 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL4A2P08572 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL4A2P08572 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.66■■□□□ 1.06
COL4A2P08572 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL4A2P08572 UNC93B5-201ENST00000530315 699 ntBASIC21.66■■□□□ 1.06
COL4A2P08572 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.66■■□□□ 1.06
COL4A2P08572 AC008175.2-201ENST00000612840 297 ntBASIC21.66■■□□□ 1.06
COL4A2P08572 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.66■■□□□ 1.06
COL4A2P08572 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.66■■□□□ 1.06
COL4A2P08572 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL4A2P08572 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
COL4A2P08572 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL4A2P08572 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.66■■□□□ 1.06
COL4A2P08572 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.66■■□□□ 1.06
COL4A2P08572 AC087742.1-201ENST00000575880 1738 ntBASIC21.66■■□□□ 1.06
COL4A2P08572 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL4A2P08572 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.65■■□□□ 1.06
COL4A2P08572 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
COL4A2P08572 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL4A2P08572 POU5F1P4-201ENST00000413175 1085 ntBASIC21.65■■□□□ 1.06
COL4A2P08572 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.65■■□□□ 1.06
COL4A2P08572 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL4A2P08572 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
COL4A2P08572 AC137767.1-201ENST00000602918 1920 ntBASIC21.64■■□□□ 1.06
COL4A2P08572 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL4A2P08572 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
COL4A2P08572 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
COL4A2P08572 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
COL4A2P08572 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.64■■□□□ 1.06
COL4A2P08572 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.64■■□□□ 1.05
COL4A2P08572 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL4A2P08572 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL4A2P08572 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL4A2P08572 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COL4A2P08572 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.64■■□□□ 1.05
COL4A2P08572 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.64■■□□□ 1.05
COL4A2P08572 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL4A2P08572 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.63■■□□□ 1.05
COL4A2P08572 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
COL4A2P08572 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
COL4A2P08572 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.63■■□□□ 1.05
COL4A2P08572 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL4A2P08572 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.63■■□□□ 1.05
COL4A2P08572 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.63■■□□□ 1.05
COL4A2P08572 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.63■■□□□ 1.05
COL4A2P08572 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms