Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSBP07858 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.26■□□□□ 0.83
CTSBP07858 CDCA4P2-201ENST00000441182 718 ntBASIC20.26■□□□□ 0.83
CTSBP07858 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTSBP07858 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTSBP07858 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CTSBP07858 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSBP07858 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.25■□□□□ 0.83
CTSBP07858 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTSBP07858 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSBP07858 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSBP07858 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
CTSBP07858 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSBP07858 RAP2CP1-201ENST00000605103 478 ntBASIC20.25■□□□□ 0.83
CTSBP07858 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.25■□□□□ 0.83
CTSBP07858 AC073111.5-205ENST00000641717 521 ntBASIC20.25■□□□□ 0.83
CTSBP07858 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSBP07858 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSBP07858 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTSBP07858 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSBP07858 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTSBP07858 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.24■□□□□ 0.83
CTSBP07858 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.24■□□□□ 0.83
CTSBP07858 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.24■□□□□ 0.83
CTSBP07858 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.24■□□□□ 0.83
CTSBP07858 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.24■□□□□ 0.83
CTSBP07858 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.24■□□□□ 0.83
CTSBP07858 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.24■□□□□ 0.83
CTSBP07858 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.24■□□□□ 0.83
CTSBP07858 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.24■□□□□ 0.83
CTSBP07858 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTSBP07858 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSBP07858 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSBP07858 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSBP07858 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTSBP07858 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSBP07858 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.23■□□□□ 0.83
CTSBP07858 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTSBP07858 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSBP07858 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTSBP07858 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CTSBP07858 AC010141.2-201ENST00000452426 721 ntBASIC20.23■□□□□ 0.83
CTSBP07858 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.23■□□□□ 0.83
CTSBP07858 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
CTSBP07858 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CTSBP07858 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTSBP07858 AC138907.5-202ENST00000569484 235 ntBASIC20.23■□□□□ 0.83
CTSBP07858 MFSD11-216ENST00000590393 1141 ntBASIC20.23■□□□□ 0.83
CTSBP07858 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSBP07858 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSBP07858 BID-214ENST00000617586 542 ntTSL 5 BASIC20.23■□□□□ 0.83
CTSBP07858 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CTSBP07858 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSBP07858 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CTSBP07858 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.22■□□□□ 0.83
CTSBP07858 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSBP07858 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.22■□□□□ 0.83
CTSBP07858 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSBP07858 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CTSBP07858 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
CTSBP07858 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.22■□□□□ 0.83
CTSBP07858 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.22■□□□□ 0.83
CTSBP07858 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.22■□□□□ 0.83
CTSBP07858 SLC7A5P2-201ENST00000553010 536 ntBASIC20.22■□□□□ 0.83
CTSBP07858 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSBP07858 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTSBP07858 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CTSBP07858 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTSBP07858 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CTSBP07858 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTSBP07858 EP400NL-214ENST00000641289 2402 ntBASIC20.21■□□□□ 0.83
CTSBP07858 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTSBP07858 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CTSBP07858 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTSBP07858 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.21■□□□□ 0.83
CTSBP07858 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.21■□□□□ 0.83
CTSBP07858 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.21■□□□□ 0.83
CTSBP07858 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.21■□□□□ 0.83
CTSBP07858 AC053503.5-201ENST00000601508 636 ntBASIC20.21■□□□□ 0.83
CTSBP07858 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.21■□□□□ 0.83
CTSBP07858 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.21■□□□□ 0.83
CTSBP07858 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CTSBP07858 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CTSBP07858 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTSBP07858 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTSBP07858 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTSBP07858 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTSBP07858 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.2■□□□□ 0.82
CTSBP07858 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTSBP07858 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTSBP07858 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTSBP07858 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.2■□□□□ 0.82
CTSBP07858 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.19■□□□□ 0.82
CTSBP07858 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSBP07858 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSBP07858 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSBP07858 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSBP07858 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSBP07858 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.19■□□□□ 0.82
CTSBP07858 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms