Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
P04436 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.46■□□□□ 0.71
P04436 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
P04436 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
P04436 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.45■□□□□ 0.7
P04436 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
P04436 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.45■□□□□ 0.7
P04436 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P04436 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
P04436 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P04436 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
P04436 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
P04436 AC090192.1-201ENST00000517740 490 ntBASIC19.45■□□□□ 0.7
P04436 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
P04436 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.45■□□□□ 0.7
P04436 AC138907.5-202ENST00000569484 235 ntBASIC19.45■□□□□ 0.7
P04436 AC053503.5-201ENST00000601508 636 ntBASIC19.45■□□□□ 0.7
P04436 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
P04436 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
P04436 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P04436 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
P04436 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P04436 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.45■□□□□ 0.7
P04436 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.44■□□□□ 0.7
P04436 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
P04436 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
P04436 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P04436 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
P04436 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
P04436 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
P04436 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
P04436 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
P04436 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.44■□□□□ 0.7
P04436 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.44■□□□□ 0.7
P04436 EEF1DP3-203ENST00000566025 782 ntBASIC19.44■□□□□ 0.7
P04436 AC080038.1-201ENST00000611274 1154 ntBASIC19.44■□□□□ 0.7
P04436 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.44■□□□□ 0.7
P04436 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P04436 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P04436 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P04436 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P04436 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P04436 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
P04436 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
P04436 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.43■□□□□ 0.7
P04436 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P04436 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
P04436 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P04436 AC010141.2-201ENST00000452426 721 ntBASIC19.43■□□□□ 0.7
P04436 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.43■□□□□ 0.7
P04436 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
P04436 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.43■□□□□ 0.7
P04436 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P04436 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
P04436 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
P04436 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P04436 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
P04436 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
P04436 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
P04436 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
P04436 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
P04436 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P04436 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P04436 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P04436 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.42■□□□□ 0.7
P04436 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P04436 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
P04436 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
P04436 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04436 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04436 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
P04436 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04436 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04436 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
P04436 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
P04436 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.41■□□□□ 0.7
P04436 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04436 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.41■□□□□ 0.7
P04436 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P04436 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P04436 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04436 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P04436 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.41■□□□□ 0.7
P04436 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.41■□□□□ 0.7
P04436 KRT18P20-201ENST00000548986 1279 ntBASIC19.41■□□□□ 0.7
P04436 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.41■□□□□ 0.7
P04436 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04436 AC011767.1-201ENST00000617410 1153 ntBASIC19.41■□□□□ 0.7
P04436 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04436 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
P04436 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P04436 AC242852.2-201ENST00000615738 1807 ntBASIC19.41■□□□□ 0.7
P04436 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.41■□□□□ 0.7
P04436 PKD1P6-201ENST00000343738 4769 ntBASIC19.41■□□□□ 0.7
P04436 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
P04436 AC233723.2-201ENST00000623798 2106 ntBASIC19.4■□□□□ 0.7
P04436 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P04436 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.4■□□□□ 0.7
P04436 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P04436 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms