Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHRNA1P02708 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHRNA1P02708 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHRNA1P02708 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHRNA1P02708 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHRNA1P02708 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHRNA1P02708 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
CHRNA1P02708 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.3■■□□□ 1.32
CHRNA1P02708 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHRNA1P02708 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHRNA1P02708 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CHRNA1P02708 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHRNA1P02708 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHRNA1P02708 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CHRNA1P02708 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHRNA1P02708 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHRNA1P02708 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.29■■□□□ 1.32
CHRNA1P02708 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHRNA1P02708 MIPEPP3-201ENST00000412105 444 ntBASIC23.29■■□□□ 1.32
CHRNA1P02708 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHRNA1P02708 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CHRNA1P02708 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.29■■□□□ 1.32
CHRNA1P02708 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
CHRNA1P02708 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CHRNA1P02708 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CHRNA1P02708 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.28■■□□□ 1.32
CHRNA1P02708 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHRNA1P02708 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHRNA1P02708 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHRNA1P02708 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CHRNA1P02708 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.28■■□□□ 1.32
CHRNA1P02708 AC093787.1-201ENST00000450396 207 ntBASIC23.28■■□□□ 1.32
CHRNA1P02708 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CHRNA1P02708 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.28■■□□□ 1.32
CHRNA1P02708 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.28■■□□□ 1.32
CHRNA1P02708 AC008175.2-201ENST00000612840 297 ntBASIC23.28■■□□□ 1.32
CHRNA1P02708 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.28■■□□□ 1.32
CHRNA1P02708 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
CHRNA1P02708 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHRNA1P02708 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHRNA1P02708 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.28■■□□□ 1.32
CHRNA1P02708 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.28■■□□□ 1.32
CHRNA1P02708 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CHRNA1P02708 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHRNA1P02708 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.27■■□□□ 1.32
CHRNA1P02708 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
CHRNA1P02708 OR10C1-204ENST00000622521 1039 ntBASIC23.27■■□□□ 1.32
CHRNA1P02708 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CHRNA1P02708 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHRNA1P02708 MKRN4P-201ENST00000444706 1521 ntBASIC23.27■■□□□ 1.32
CHRNA1P02708 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CHRNA1P02708 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHRNA1P02708 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHRNA1P02708 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CHRNA1P02708 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CHRNA1P02708 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
CHRNA1P02708 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
CHRNA1P02708 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
CHRNA1P02708 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CHRNA1P02708 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.26■■□□□ 1.31
CHRNA1P02708 POU5F1P4-201ENST00000413175 1085 ntBASIC23.26■■□□□ 1.31
CHRNA1P02708 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.26■■□□□ 1.31
CHRNA1P02708 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.26■■□□□ 1.31
CHRNA1P02708 MIR4758-201ENST00000577688 71 ntBASIC23.26■■□□□ 1.31
CHRNA1P02708 AC016405.3-201ENST00000607710 860 ntBASIC23.26■■□□□ 1.31
CHRNA1P02708 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CHRNA1P02708 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CHRNA1P02708 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.26■■□□□ 1.31
CHRNA1P02708 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.25■■□□□ 1.31
CHRNA1P02708 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHRNA1P02708 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.25■■□□□ 1.31
CHRNA1P02708 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHRNA1P02708 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHRNA1P02708 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHRNA1P02708 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHRNA1P02708 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHRNA1P02708 AC120498.10-201ENST00000621827 505 ntBASIC23.25■■□□□ 1.31
CHRNA1P02708 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.25■■□□□ 1.31
CHRNA1P02708 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHRNA1P02708 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHRNA1P02708 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CHRNA1P02708 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHRNA1P02708 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHRNA1P02708 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHRNA1P02708 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHRNA1P02708 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHRNA1P02708 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHRNA1P02708 AL512625.2-201ENST00000417533 625 ntBASIC23.24■■□□□ 1.31
CHRNA1P02708 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.24■■□□□ 1.31
CHRNA1P02708 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHRNA1P02708 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.24■■□□□ 1.31
CHRNA1P02708 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
CHRNA1P02708 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.24■■□□□ 1.31
CHRNA1P02708 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.24■■□□□ 1.31
CHRNA1P02708 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.24■■□□□ 1.31
CHRNA1P02708 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHRNA1P02708 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CHRNA1P02708 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHRNA1P02708 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHRNA1P02708 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms