Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDRT1O95170 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDRT1O95170 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CDRT1O95170 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDRT1O95170 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CDRT1O95170 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDRT1O95170 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDRT1O95170 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.91■□□□□ 0.62
CDRT1O95170 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CDRT1O95170 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDRT1O95170 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDRT1O95170 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDRT1O95170 AC004687.1-201ENST00000579003 1625 ntBASIC18.91■□□□□ 0.62
CDRT1O95170 AC005703.6-201ENST00000623265 1329 ntBASIC18.91■□□□□ 0.62
CDRT1O95170 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.91■□□□□ 0.62
CDRT1O95170 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDRT1O95170 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDRT1O95170 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDRT1O95170 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.91■□□□□ 0.62
CDRT1O95170 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CDRT1O95170 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDRT1O95170 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDRT1O95170 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.9■□□□□ 0.62
CDRT1O95170 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDRT1O95170 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDRT1O95170 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDRT1O95170 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDRT1O95170 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDRT1O95170 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.9■□□□□ 0.62
CDRT1O95170 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.9■□□□□ 0.62
CDRT1O95170 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDRT1O95170 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDRT1O95170 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.9■□□□□ 0.62
CDRT1O95170 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CDRT1O95170 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDRT1O95170 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.9■□□□□ 0.62
CDRT1O95170 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDRT1O95170 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDRT1O95170 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDRT1O95170 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDRT1O95170 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDRT1O95170 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDRT1O95170 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDRT1O95170 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.89■□□□□ 0.62
CDRT1O95170 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CDRT1O95170 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDRT1O95170 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDRT1O95170 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDRT1O95170 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CDRT1O95170 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDRT1O95170 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDRT1O95170 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDRT1O95170 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.89■□□□□ 0.61
CDRT1O95170 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDRT1O95170 MIR6722-201ENST00000617286 78 ntBASIC18.89■□□□□ 0.61
CDRT1O95170 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDRT1O95170 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.89■□□□□ 0.61
CDRT1O95170 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDRT1O95170 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CDRT1O95170 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDRT1O95170 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.89■□□□□ 0.61
CDRT1O95170 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CDRT1O95170 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDRT1O95170 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDRT1O95170 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDRT1O95170 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDRT1O95170 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDRT1O95170 AC026471.6-201ENST00000622954 1905 ntBASIC18.88■□□□□ 0.61
CDRT1O95170 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CDRT1O95170 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CDRT1O95170 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDRT1O95170 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CDRT1O95170 DUX4L4-201ENST00000566884 1269 ntBASIC18.88■□□□□ 0.61
CDRT1O95170 AC104564.3-201ENST00000582367 638 ntBASIC18.88■□□□□ 0.61
CDRT1O95170 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CDRT1O95170 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDRT1O95170 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDRT1O95170 AC021242.3-201ENST00000607598 1377 ntBASIC18.88■□□□□ 0.61
CDRT1O95170 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CDRT1O95170 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.88■□□□□ 0.61
CDRT1O95170 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CDRT1O95170 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDRT1O95170 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDRT1O95170 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.88■□□□□ 0.61
CDRT1O95170 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDRT1O95170 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDRT1O95170 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDRT1O95170 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDRT1O95170 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.88■□□□□ 0.61
CDRT1O95170 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDRT1O95170 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDRT1O95170 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CDRT1O95170 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDRT1O95170 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.87■□□□□ 0.61
CDRT1O95170 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CDRT1O95170 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDRT1O95170 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDRT1O95170 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDRT1O95170 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDRT1O95170 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms