Protein–RNA interactions for Protein: O75317

USP12, Ubiquitin carboxyl-terminal hydrolase 12, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP12O75317 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.7■■□□□ 1.07
USP12O75317 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
USP12O75317 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP12O75317 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP12O75317 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.7■■□□□ 1.06
USP12O75317 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP12O75317 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.7■■□□□ 1.06
USP12O75317 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.7■■□□□ 1.06
USP12O75317 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.7■■□□□ 1.06
USP12O75317 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP12O75317 TSPY26P-201ENST00000476365 1326 ntBASIC21.7■■□□□ 1.06
USP12O75317 AC244015.2-201ENST00000616358 1861 ntBASIC21.7■■□□□ 1.06
USP12O75317 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
USP12O75317 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
USP12O75317 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP12O75317 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP12O75317 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP12O75317 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
USP12O75317 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP12O75317 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.69■■□□□ 1.06
USP12O75317 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP12O75317 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
USP12O75317 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP12O75317 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
USP12O75317 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP12O75317 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP12O75317 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.69■■□□□ 1.06
USP12O75317 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP12O75317 AL137784.2-201ENST00000607332 1000 ntBASIC21.69■■□□□ 1.06
USP12O75317 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.69■■□□□ 1.06
USP12O75317 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP12O75317 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP12O75317 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP12O75317 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.69■■□□□ 1.06
USP12O75317 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP12O75317 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.68■■□□□ 1.06
USP12O75317 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP12O75317 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP12O75317 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP12O75317 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.68■■□□□ 1.06
USP12O75317 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.68■■□□□ 1.06
USP12O75317 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
USP12O75317 YBX1P1-201ENST00000445822 960 ntBASIC21.68■■□□□ 1.06
USP12O75317 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.68■■□□□ 1.06
USP12O75317 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.68■■□□□ 1.06
USP12O75317 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
USP12O75317 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.68■■□□□ 1.06
USP12O75317 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
USP12O75317 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP12O75317 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.68■■□□□ 1.06
USP12O75317 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
USP12O75317 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.68■■□□□ 1.06
USP12O75317 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.68■■□□□ 1.06
USP12O75317 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.68■■□□□ 1.06
USP12O75317 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP12O75317 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.68■■□□□ 1.06
USP12O75317 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP12O75317 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.67■■□□□ 1.06
USP12O75317 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.67■■□□□ 1.06
USP12O75317 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP12O75317 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
USP12O75317 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.67■■□□□ 1.06
USP12O75317 KRT18P5-201ENST00000436075 1291 ntBASIC21.67■■□□□ 1.06
USP12O75317 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
USP12O75317 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.67■■□□□ 1.06
USP12O75317 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
USP12O75317 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.67■■□□□ 1.06
USP12O75317 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.67■■□□□ 1.06
USP12O75317 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP12O75317 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
USP12O75317 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.66■■□□□ 1.06
USP12O75317 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.66■■□□□ 1.06
USP12O75317 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP12O75317 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.66■■□□□ 1.06
USP12O75317 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP12O75317 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP12O75317 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.66■■□□□ 1.06
USP12O75317 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP12O75317 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP12O75317 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.66■■□□□ 1.06
USP12O75317 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP12O75317 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP12O75317 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.66■■□□□ 1.06
USP12O75317 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.66■■□□□ 1.06
USP12O75317 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP12O75317 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.66■■□□□ 1.06
USP12O75317 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP12O75317 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP12O75317 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.66■■□□□ 1.06
USP12O75317 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP12O75317 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP12O75317 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
USP12O75317 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP12O75317 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP12O75317 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.65■■□□□ 1.06
USP12O75317 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP12O75317 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP12O75317 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP12O75317 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.65■■□□□ 1.06
USP12O75317 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms