Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
URB1O60287 AP003733.4-201ENST00000623785 1697 ntBASIC20.12■□□□□ 0.81
URB1O60287 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.12■□□□□ 0.81
URB1O60287 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.12■□□□□ 0.81
URB1O60287 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
URB1O60287 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
URB1O60287 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
URB1O60287 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
URB1O60287 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.11■□□□□ 0.81
URB1O60287 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.11■□□□□ 0.81
URB1O60287 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.11■□□□□ 0.81
URB1O60287 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
URB1O60287 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
URB1O60287 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
URB1O60287 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
URB1O60287 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.1■□□□□ 0.81
URB1O60287 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.1■□□□□ 0.81
URB1O60287 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.1■□□□□ 0.81
URB1O60287 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
URB1O60287 DUSP8P5-201ENST00000422884 1815 ntBASIC20.1■□□□□ 0.81
URB1O60287 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
URB1O60287 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.1■□□□□ 0.81
URB1O60287 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
URB1O60287 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.1■□□□□ 0.81
URB1O60287 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.1■□□□□ 0.81
URB1O60287 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
URB1O60287 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
URB1O60287 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
URB1O60287 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.09■□□□□ 0.81
URB1O60287 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
URB1O60287 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.09■□□□□ 0.81
URB1O60287 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
URB1O60287 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.09■□□□□ 0.81
URB1O60287 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
URB1O60287 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.09■□□□□ 0.81
URB1O60287 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.09■□□□□ 0.81
URB1O60287 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.09■□□□□ 0.81
URB1O60287 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
URB1O60287 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.09■□□□□ 0.81
URB1O60287 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.09■□□□□ 0.81
URB1O60287 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
URB1O60287 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
URB1O60287 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
URB1O60287 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
URB1O60287 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
URB1O60287 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
URB1O60287 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
URB1O60287 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
URB1O60287 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
URB1O60287 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
URB1O60287 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
URB1O60287 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
URB1O60287 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
URB1O60287 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
URB1O60287 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
URB1O60287 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.08■□□□□ 0.81
URB1O60287 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.08■□□□□ 0.81
URB1O60287 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.08■□□□□ 0.81
URB1O60287 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.08■□□□□ 0.81
URB1O60287 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.08■□□□□ 0.81
URB1O60287 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
URB1O60287 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
URB1O60287 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
URB1O60287 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
URB1O60287 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
URB1O60287 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
URB1O60287 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.07■□□□□ 0.8
URB1O60287 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
URB1O60287 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
URB1O60287 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
URB1O60287 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.07■□□□□ 0.8
URB1O60287 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
URB1O60287 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.07■□□□□ 0.8
URB1O60287 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
URB1O60287 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
URB1O60287 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
URB1O60287 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.06■□□□□ 0.8
URB1O60287 AL359736.2-201ENST00000621992 437 ntBASIC20.06■□□□□ 0.8
URB1O60287 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
URB1O60287 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
URB1O60287 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
URB1O60287 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
URB1O60287 LINC01124-201ENST00000409786 2117 ntBASIC20.06■□□□□ 0.8
URB1O60287 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
URB1O60287 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
URB1O60287 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
URB1O60287 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
URB1O60287 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.06■□□□□ 0.8
URB1O60287 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
URB1O60287 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.06■□□□□ 0.8
URB1O60287 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.06■□□□□ 0.8
URB1O60287 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
URB1O60287 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.06■□□□□ 0.8
URB1O60287 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
URB1O60287 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
URB1O60287 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
URB1O60287 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.05■□□□□ 0.8
URB1O60287 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.05■□□□□ 0.8
URB1O60287 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
URB1O60287 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms