Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF13O43567 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF13O43567 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF13O43567 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF13O43567 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF13O43567 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RNF13O43567 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RNF13O43567 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF13O43567 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF13O43567 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF13O43567 PBX2P1-201ENST00000493219 1291 ntBASIC19.31■□□□□ 0.68
RNF13O43567 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF13O43567 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF13O43567 AC233992.3-201ENST00000607491 485 ntBASIC19.31■□□□□ 0.68
RNF13O43567 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RNF13O43567 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF13O43567 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF13O43567 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF13O43567 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RNF13O43567 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF13O43567 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF13O43567 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF13O43567 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF13O43567 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF13O43567 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF13O43567 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF13O43567 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF13O43567 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF13O43567 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF13O43567 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF13O43567 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF13O43567 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
RNF13O43567 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF13O43567 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF13O43567 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF13O43567 AC126544.1-201ENST00000580842 1059 ntBASIC19.3■□□□□ 0.68
RNF13O43567 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RNF13O43567 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
RNF13O43567 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF13O43567 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF13O43567 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RNF13O43567 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF13O43567 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF13O43567 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF13O43567 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF13O43567 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RNF13O43567 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
RNF13O43567 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF13O43567 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RNF13O43567 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF13O43567 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF13O43567 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF13O43567 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF13O43567 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RNF13O43567 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF13O43567 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF13O43567 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF13O43567 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF13O43567 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF13O43567 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF13O43567 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF13O43567 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF13O43567 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF13O43567 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF13O43567 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RNF13O43567 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF13O43567 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF13O43567 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF13O43567 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF13O43567 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF13O43567 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF13O43567 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF13O43567 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF13O43567 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RNF13O43567 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF13O43567 AC008764.7-201ENST00000593779 1081 ntBASIC19.28■□□□□ 0.68
RNF13O43567 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF13O43567 AC073130.3-201ENST00000624389 2278 ntBASIC19.28■□□□□ 0.68
RNF13O43567 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RNF13O43567 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF13O43567 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF13O43567 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF13O43567 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RNF13O43567 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF13O43567 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF13O43567 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
RNF13O43567 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF13O43567 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF13O43567 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF13O43567 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF13O43567 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.27■□□□□ 0.68
RNF13O43567 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF13O43567 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RNF13O43567 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RNF13O43567 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.27■□□□□ 0.67
RNF13O43567 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF13O43567 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF13O43567 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
RNF13O43567 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.27■□□□□ 0.67
RNF13O43567 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms