Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN4O14817 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN4O14817 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN4O14817 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
TSPAN4O14817 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
TSPAN4O14817 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TSPAN4O14817 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.72■□□□□ 0.43
TSPAN4O14817 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN4O14817 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN4O14817 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TSPAN4O14817 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN4O14817 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN4O14817 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN4O14817 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TSPAN4O14817 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
TSPAN4O14817 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TSPAN4O14817 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.72■□□□□ 0.43
TSPAN4O14817 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TSPAN4O14817 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TSPAN4O14817 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.72■□□□□ 0.43
TSPAN4O14817 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TSPAN4O14817 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN4O14817 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN4O14817 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
TSPAN4O14817 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN4O14817 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN4O14817 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TSPAN4O14817 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN4O14817 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN4O14817 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TSPAN4O14817 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.71■□□□□ 0.43
TSPAN4O14817 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
TSPAN4O14817 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TSPAN4O14817 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN4O14817 AC139530.1-201ENST00000575312 1977 ntBASIC17.71■□□□□ 0.43
TSPAN4O14817 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN4O14817 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN4O14817 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN4O14817 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN4O14817 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSPAN4O14817 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TSPAN4O14817 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TSPAN4O14817 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN4O14817 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.7■□□□□ 0.42
TSPAN4O14817 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN4O14817 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN4O14817 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN4O14817 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN4O14817 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN4O14817 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN4O14817 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.7■□□□□ 0.42
TSPAN4O14817 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TSPAN4O14817 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TSPAN4O14817 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.7■□□□□ 0.42
TSPAN4O14817 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TSPAN4O14817 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN4O14817 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TSPAN4O14817 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN4O14817 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSPAN4O14817 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.69■□□□□ 0.42
TSPAN4O14817 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN4O14817 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN4O14817 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN4O14817 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN4O14817 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.69■□□□□ 0.42
TSPAN4O14817 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN4O14817 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TSPAN4O14817 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.69■□□□□ 0.42
TSPAN4O14817 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN4O14817 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN4O14817 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN4O14817 AC103834.1-201ENST00000520383 144 ntBASIC17.69■□□□□ 0.42
TSPAN4O14817 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.69■□□□□ 0.42
TSPAN4O14817 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
TSPAN4O14817 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TSPAN4O14817 KRT8P33-201ENST00000508125 1423 ntBASIC17.69■□□□□ 0.42
TSPAN4O14817 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN4O14817 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN4O14817 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN4O14817 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TSPAN4O14817 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN4O14817 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
TSPAN4O14817 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.69■□□□□ 0.42
TSPAN4O14817 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN4O14817 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TSPAN4O14817 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.69■□□□□ 0.42
TSPAN4O14817 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
TSPAN4O14817 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSPAN4O14817 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.68■□□□□ 0.42
TSPAN4O14817 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TSPAN4O14817 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSPAN4O14817 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSPAN4O14817 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TSPAN4O14817 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TSPAN4O14817 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.68■□□□□ 0.42
TSPAN4O14817 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSPAN4O14817 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSPAN4O14817 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSPAN4O14817 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.68■□□□□ 0.42
TSPAN4O14817 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms