Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.34■□□□□ 0.21
NDUFA4O00483 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFA4O00483 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.34■□□□□ 0.21
NDUFA4O00483 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.34■□□□□ 0.21
NDUFA4O00483 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.34■□□□□ 0.21
NDUFA4O00483 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.34■□□□□ 0.21
NDUFA4O00483 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.34■□□□□ 0.21
NDUFA4O00483 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFA4O00483 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.34■□□□□ 0.21
NDUFA4O00483 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
NDUFA4O00483 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
NDUFA4O00483 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.33■□□□□ 0.21
NDUFA4O00483 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFA4O00483 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NDUFA4O00483 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFA4O00483 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFA4O00483 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
NDUFA4O00483 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.33■□□□□ 0.2
NDUFA4O00483 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFA4O00483 AC055733.4-201ENST00000638462 1354 ntBASIC16.33■□□□□ 0.2
NDUFA4O00483 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.33■□□□□ 0.2
NDUFA4O00483 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFA4O00483 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFA4O00483 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFA4O00483 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.33■□□□□ 0.2
NDUFA4O00483 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFA4O00483 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFA4O00483 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NDUFA4O00483 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFA4O00483 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFA4O00483 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NDUFA4O00483 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.32■□□□□ 0.2
NDUFA4O00483 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.32■□□□□ 0.2
NDUFA4O00483 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
NDUFA4O00483 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.32■□□□□ 0.2
NDUFA4O00483 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
NDUFA4O00483 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.32■□□□□ 0.2
NDUFA4O00483 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NDUFA4O00483 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.32■□□□□ 0.2
NDUFA4O00483 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.32■□□□□ 0.2
NDUFA4O00483 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
NDUFA4O00483 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
NDUFA4O00483 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFA4O00483 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NDUFA4O00483 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NDUFA4O00483 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NDUFA4O00483 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFA4O00483 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.31■□□□□ 0.2
NDUFA4O00483 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.31■□□□□ 0.2
NDUFA4O00483 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.31■□□□□ 0.2
NDUFA4O00483 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.31■□□□□ 0.2
NDUFA4O00483 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFA4O00483 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFA4O00483 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFA4O00483 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFA4O00483 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFA4O00483 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFA4O00483 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFA4O00483 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA4O00483 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA4O00483 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFA4O00483 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.3■□□□□ 0.2
NDUFA4O00483 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.3■□□□□ 0.2
NDUFA4O00483 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA4O00483 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA4O00483 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFA4O00483 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.3■□□□□ 0.2
NDUFA4O00483 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA4O00483 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA4O00483 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.3■□□□□ 0.2
NDUFA4O00483 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.3■□□□□ 0.2
NDUFA4O00483 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA4O00483 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFA4O00483 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.3■□□□□ 0.2
NDUFA4O00483 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA4O00483 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFA4O00483 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA4O00483 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA4O00483 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA4O00483 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA4O00483 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA4O00483 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA4O00483 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA4O00483 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.29■□□□□ 0.2
NDUFA4O00483 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA4O00483 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA4O00483 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NDUFA4O00483 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.29■□□□□ 0.2
NDUFA4O00483 AC027612.3-201ENST00000413684 1047 ntBASIC16.29■□□□□ 0.2
NDUFA4O00483 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.29■□□□□ 0.2
NDUFA4O00483 TPRG1LP1-201ENST00000598702 760 ntBASIC16.29■□□□□ 0.2
NDUFA4O00483 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.29■□□□□ 0.2
NDUFA4O00483 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.29■□□□□ 0.2
NDUFA4O00483 MIR6084-201ENST00000622012 110 ntBASIC16.29■□□□□ 0.2
NDUFA4O00483 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NDUFA4O00483 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA4O00483 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA4O00483 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFA4O00483 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.29■□□□□ 0.2
NDUFA4O00483 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms