Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 TPRG1LP1-201ENST00000598702 760 ntBASIC20.84■□□□□ 0.93
EIF3FO00303 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.84■□□□□ 0.93
EIF3FO00303 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EIF3FO00303 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EIF3FO00303 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.84■□□□□ 0.93
EIF3FO00303 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EIF3FO00303 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EIF3FO00303 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
EIF3FO00303 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
EIF3FO00303 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EIF3FO00303 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.83■□□□□ 0.93
EIF3FO00303 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
EIF3FO00303 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.83■□□□□ 0.93
EIF3FO00303 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.83■□□□□ 0.93
EIF3FO00303 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
EIF3FO00303 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
EIF3FO00303 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
EIF3FO00303 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
EIF3FO00303 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
EIF3FO00303 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.83■□□□□ 0.92
EIF3FO00303 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.83■□□□□ 0.92
EIF3FO00303 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
EIF3FO00303 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.82■□□□□ 0.92
EIF3FO00303 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EIF3FO00303 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EIF3FO00303 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.82■□□□□ 0.92
EIF3FO00303 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
EIF3FO00303 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.82■□□□□ 0.92
EIF3FO00303 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.82■□□□□ 0.92
EIF3FO00303 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.82■□□□□ 0.92
EIF3FO00303 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EIF3FO00303 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.82■□□□□ 0.92
EIF3FO00303 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.82■□□□□ 0.92
EIF3FO00303 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EIF3FO00303 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EIF3FO00303 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3FO00303 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3FO00303 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3FO00303 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3FO00303 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3FO00303 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.81■□□□□ 0.92
EIF3FO00303 AC027612.3-201ENST00000413684 1047 ntBASIC20.81■□□□□ 0.92
EIF3FO00303 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.81■□□□□ 0.92
EIF3FO00303 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.81■□□□□ 0.92
EIF3FO00303 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3FO00303 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.81■□□□□ 0.92
EIF3FO00303 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.81■□□□□ 0.92
EIF3FO00303 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.81■□□□□ 0.92
EIF3FO00303 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.81■□□□□ 0.92
EIF3FO00303 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3FO00303 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3FO00303 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
EIF3FO00303 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
EIF3FO00303 Z98882.1-201ENST00000622160 2253 ntBASIC20.8■□□□□ 0.92
EIF3FO00303 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.8■□□□□ 0.92
EIF3FO00303 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
EIF3FO00303 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.8■□□□□ 0.92
EIF3FO00303 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
EIF3FO00303 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.8■□□□□ 0.92
EIF3FO00303 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.8■□□□□ 0.92
EIF3FO00303 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
EIF3FO00303 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.8■□□□□ 0.92
EIF3FO00303 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.8■□□□□ 0.92
EIF3FO00303 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.8■□□□□ 0.92
EIF3FO00303 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.8■□□□□ 0.92
EIF3FO00303 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.8■□□□□ 0.92
EIF3FO00303 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EIF3FO00303 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
EIF3FO00303 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
EIF3FO00303 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.8■□□□□ 0.92
EIF3FO00303 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EIF3FO00303 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EIF3FO00303 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
EIF3FO00303 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EIF3FO00303 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EIF3FO00303 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.79■□□□□ 0.92
EIF3FO00303 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
EIF3FO00303 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EIF3FO00303 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.79■□□□□ 0.92
EIF3FO00303 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
EIF3FO00303 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.79■□□□□ 0.92
EIF3FO00303 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
EIF3FO00303 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EIF3FO00303 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.79■□□□□ 0.92
EIF3FO00303 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
EIF3FO00303 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EIF3FO00303 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
EIF3FO00303 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
EIF3FO00303 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.78■□□□□ 0.92
EIF3FO00303 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3FO00303 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3FO00303 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
EIF3FO00303 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
EIF3FO00303 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3FO00303 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3FO00303 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3FO00303 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3FO00303 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.78■□□□□ 0.92
EIF3FO00303 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EIF3FO00303 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms