Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.41■■□□□ 1.02
TCRBV9S1A1TA0A576 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TCRBV9S1A1TA0A576 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
TCRBV9S1A1TA0A576 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.41■■□□□ 1.02
TCRBV9S1A1TA0A576 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TCRBV9S1A1TA0A576 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.41■■□□□ 1.02
TCRBV9S1A1TA0A576 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.41■■□□□ 1.02
TCRBV9S1A1TA0A576 SYT6-210ENST00000641643 1587 ntBASIC21.41■■□□□ 1.02
TCRBV9S1A1TA0A576 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TCRBV9S1A1TA0A576 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
TCRBV9S1A1TA0A576 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
TCRBV9S1A1TA0A576 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TCRBV9S1A1TA0A576 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TCRBV9S1A1TA0A576 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TCRBV9S1A1TA0A576 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.41■■□□□ 1.02
TCRBV9S1A1TA0A576 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.41■■□□□ 1.02
TCRBV9S1A1TA0A576 AL049796.1-201ENST00000565336 1766 ntBASIC21.41■■□□□ 1.02
TCRBV9S1A1TA0A576 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TCRBV9S1A1TA0A576 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TCRBV9S1A1TA0A576 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TCRBV9S1A1TA0A576 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TCRBV9S1A1TA0A576 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
TCRBV9S1A1TA0A576 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.4■■□□□ 1.02
TCRBV9S1A1TA0A576 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TCRBV9S1A1TA0A576 AC136469.2-201ENST00000623944 1028 ntBASIC21.4■■□□□ 1.02
TCRBV9S1A1TA0A576 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TCRBV9S1A1TA0A576 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.4■■□□□ 1.02
TCRBV9S1A1TA0A576 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TCRBV9S1A1TA0A576 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.02
TCRBV9S1A1TA0A576 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TCRBV9S1A1TA0A576 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
TCRBV9S1A1TA0A576 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TCRBV9S1A1TA0A576 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TCRBV9S1A1TA0A576 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TCRBV9S1A1TA0A576 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TCRBV9S1A1TA0A576 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.39■■□□□ 1.01
TCRBV9S1A1TA0A576 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TCRBV9S1A1TA0A576 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
TCRBV9S1A1TA0A576 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TCRBV9S1A1TA0A576 SLC47A1P1-202ENST00000449666 945 ntBASIC21.39■■□□□ 1.01
TCRBV9S1A1TA0A576 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.39■■□□□ 1.01
TCRBV9S1A1TA0A576 AP005435.1-201ENST00000529293 1178 ntBASIC21.39■■□□□ 1.01
TCRBV9S1A1TA0A576 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.39■■□□□ 1.01
TCRBV9S1A1TA0A576 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.39■■□□□ 1.01
TCRBV9S1A1TA0A576 MIR4466-201ENST00000606121 54 ntBASIC21.39■■□□□ 1.01
TCRBV9S1A1TA0A576 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TCRBV9S1A1TA0A576 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
TCRBV9S1A1TA0A576 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TCRBV9S1A1TA0A576 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
TCRBV9S1A1TA0A576 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TCRBV9S1A1TA0A576 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.38■■□□□ 1.01
TCRBV9S1A1TA0A576 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.38■■□□□ 1.01
TCRBV9S1A1TA0A576 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TCRBV9S1A1TA0A576 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TCRBV9S1A1TA0A576 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TCRBV9S1A1TA0A576 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TCRBV9S1A1TA0A576 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TCRBV9S1A1TA0A576 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TCRBV9S1A1TA0A576 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.38■■□□□ 1.01
TCRBV9S1A1TA0A576 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
TCRBV9S1A1TA0A576 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.38■■□□□ 1.01
TCRBV9S1A1TA0A576 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TCRBV9S1A1TA0A576 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TCRBV9S1A1TA0A576 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.38■■□□□ 1.01
TCRBV9S1A1TA0A576 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TCRBV9S1A1TA0A576 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TCRBV9S1A1TA0A576 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TCRBV9S1A1TA0A576 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TCRBV9S1A1TA0A576 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.37■■□□□ 1.01
TCRBV9S1A1TA0A576 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.37■■□□□ 1.01
TCRBV9S1A1TA0A576 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCRBV9S1A1TA0A576 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCRBV9S1A1TA0A576 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.37■■□□□ 1.01
TCRBV9S1A1TA0A576 DUX4L19-201ENST00000557448 1267 ntBASIC21.37■■□□□ 1.01
TCRBV9S1A1TA0A576 AC011298.3-201ENST00000615796 283 ntBASIC21.37■■□□□ 1.01
TCRBV9S1A1TA0A576 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCRBV9S1A1TA0A576 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
TCRBV9S1A1TA0A576 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCRBV9S1A1TA0A576 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCRBV9S1A1TA0A576 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCRBV9S1A1TA0A576 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCRBV9S1A1TA0A576 LINC01521-201ENST00000504184 1943 ntBASIC21.37■■□□□ 1.01
TCRBV9S1A1TA0A576 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCRBV9S1A1TA0A576 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TCRBV9S1A1TA0A576 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TCRBV9S1A1TA0A576 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TCRBV9S1A1TA0A576 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.36■■□□□ 1.01
TCRBV9S1A1TA0A576 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TCRBV9S1A1TA0A576 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.36■■□□□ 1.01
TCRBV9S1A1TA0A576 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.36■■□□□ 1.01
TCRBV9S1A1TA0A576 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.36■■□□□ 1.01
TCRBV9S1A1TA0A576 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TCRBV9S1A1TA0A576 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.36■■□□□ 1.01
TCRBV9S1A1TA0A576 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TCRBV9S1A1TA0A576 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.36■■□□□ 1.01
TCRBV9S1A1TA0A576 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TCRBV9S1A1TA0A576 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TCRBV9S1A1TA0A576 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TCRBV9S1A1TA0A576 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TCRBV9S1A1TA0A576 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms