Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TRDV1A0A1B0GX56 MIR4508-201ENST00000584178 70 ntBASIC18.71■□□□□ 0.59
TRDV1A0A1B0GX56 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.71■□□□□ 0.59
TRDV1A0A1B0GX56 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRDV1A0A1B0GX56 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.71■□□□□ 0.59
TRDV1A0A1B0GX56 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.71■□□□□ 0.59
TRDV1A0A1B0GX56 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TRDV1A0A1B0GX56 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRDV1A0A1B0GX56 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.71■□□□□ 0.58
TRDV1A0A1B0GX56 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 AC010980.1-201ENST00000587192 1142 ntBASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRDV1A0A1B0GX56 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRDV1A0A1B0GX56 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRDV1A0A1B0GX56 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRDV1A0A1B0GX56 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.69■□□□□ 0.58
TRDV1A0A1B0GX56 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRDV1A0A1B0GX56 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRDV1A0A1B0GX56 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.69■□□□□ 0.58
TRDV1A0A1B0GX56 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRDV1A0A1B0GX56 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRDV1A0A1B0GX56 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRDV1A0A1B0GX56 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.69■□□□□ 0.58
TRDV1A0A1B0GX56 RNF165-205ENST00000588679 2904 ntBASIC18.69■□□□□ 0.58
TRDV1A0A1B0GX56 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.69■□□□□ 0.58
TRDV1A0A1B0GX56 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.69■□□□□ 0.58
TRDV1A0A1B0GX56 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRDV1A0A1B0GX56 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRDV1A0A1B0GX56 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.68■□□□□ 0.58
TRDV1A0A1B0GX56 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRDV1A0A1B0GX56 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRDV1A0A1B0GX56 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRDV1A0A1B0GX56 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.68■□□□□ 0.58
TRDV1A0A1B0GX56 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRDV1A0A1B0GX56 AC073314.1-201ENST00000568729 2216 ntBASIC18.68■□□□□ 0.58
TRDV1A0A1B0GX56 AC006128.1-201ENST00000624704 1661 ntBASIC18.68■□□□□ 0.58
TRDV1A0A1B0GX56 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRDV1A0A1B0GX56 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.68■□□□□ 0.58
TRDV1A0A1B0GX56 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRDV1A0A1B0GX56 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
TRDV1A0A1B0GX56 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRDV1A0A1B0GX56 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRDV1A0A1B0GX56 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.68■□□□□ 0.58
TRDV1A0A1B0GX56 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.67■□□□□ 0.58
TRDV1A0A1B0GX56 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRDV1A0A1B0GX56 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRDV1A0A1B0GX56 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRDV1A0A1B0GX56 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
TRDV1A0A1B0GX56 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
TRDV1A0A1B0GX56 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRDV1A0A1B0GX56 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRDV1A0A1B0GX56 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TRDV1A0A1B0GX56 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRDV1A0A1B0GX56 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.67■□□□□ 0.58
TRDV1A0A1B0GX56 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRDV1A0A1B0GX56 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
TRDV1A0A1B0GX56 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRDV1A0A1B0GX56 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRDV1A0A1B0GX56 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRDV1A0A1B0GX56 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRDV1A0A1B0GX56 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRDV1A0A1B0GX56 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms