Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-2A0A0B4J237 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-2A0A0B4J237 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV8-2A0A0B4J237 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
TRAV8-2A0A0B4J237 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV8-2A0A0B4J237 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-2A0A0B4J237 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-2A0A0B4J237 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-2A0A0B4J237 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV8-2A0A0B4J237 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-2A0A0B4J237 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV8-2A0A0B4J237 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.14■□□□□ 0.17
TRAV8-2A0A0B4J237 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV8-2A0A0B4J237 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV8-2A0A0B4J237 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV8-2A0A0B4J237 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV8-2A0A0B4J237 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TRAV8-2A0A0B4J237 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-2A0A0B4J237 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV8-2A0A0B4J237 AL024507.2-201ENST00000606070 2574 ntBASIC16.14■□□□□ 0.17
TRAV8-2A0A0B4J237 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-2A0A0B4J237 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV8-2A0A0B4J237 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-2A0A0B4J237 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV8-2A0A0B4J237 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV8-2A0A0B4J237 AC104564.3-201ENST00000582367 638 ntBASIC16.13■□□□□ 0.17
TRAV8-2A0A0B4J237 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV8-2A0A0B4J237 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-2A0A0B4J237 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV8-2A0A0B4J237 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-2A0A0B4J237 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-2A0A0B4J237 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-2A0A0B4J237 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-2A0A0B4J237 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-2A0A0B4J237 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV8-2A0A0B4J237 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV8-2A0A0B4J237 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRAV8-2A0A0B4J237 AL136116.3-201ENST00000402907 1138 ntBASIC16.12■□□□□ 0.17
TRAV8-2A0A0B4J237 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV8-2A0A0B4J237 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-2A0A0B4J237 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-2A0A0B4J237 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV8-2A0A0B4J237 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-2A0A0B4J237 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-2A0A0B4J237 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV8-2A0A0B4J237 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-2A0A0B4J237 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-2A0A0B4J237 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-2A0A0B4J237 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-2A0A0B4J237 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-2A0A0B4J237 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-2A0A0B4J237 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-2A0A0B4J237 FEM1AP4-201ENST00000443167 1987 ntBASIC16.11■□□□□ 0.17
TRAV8-2A0A0B4J237 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV8-2A0A0B4J237 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV8-2A0A0B4J237 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-2A0A0B4J237 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-2A0A0B4J237 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRAV8-2A0A0B4J237 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-2A0A0B4J237 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV8-2A0A0B4J237 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRAV8-2A0A0B4J237 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-2A0A0B4J237 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-2A0A0B4J237 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-2A0A0B4J237 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-2A0A0B4J237 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRAV8-2A0A0B4J237 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV8-2A0A0B4J237 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
TRAV8-2A0A0B4J237 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-2A0A0B4J237 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.1■□□□□ 0.17
TRAV8-2A0A0B4J237 AL034346.1-201ENST00000568244 1277 ntBASIC16.1■□□□□ 0.17
TRAV8-2A0A0B4J237 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV8-2A0A0B4J237 AP004607.7-201ENST00000527152 1677 ntBASIC16.1■□□□□ 0.17
TRAV8-2A0A0B4J237 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-2A0A0B4J237 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-2A0A0B4J237 AF106564.1-201ENST00000607058 2553 ntBASIC16.1■□□□□ 0.17
TRAV8-2A0A0B4J237 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV8-2A0A0B4J237 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV8-2A0A0B4J237 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-2A0A0B4J237 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
TRAV8-2A0A0B4J237 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-2A0A0B4J237 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-2A0A0B4J237 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-2A0A0B4J237 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV8-2A0A0B4J237 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-2A0A0B4J237 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-2A0A0B4J237 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-2A0A0B4J237 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-2A0A0B4J237 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-2A0A0B4J237 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-2A0A0B4J237 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV8-2A0A0B4J237 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV8-2A0A0B4J237 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-2A0A0B4J237 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-2A0A0B4J237 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-2A0A0B4J237 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-2A0A0B4J237 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV8-2A0A0B4J237 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV8-2A0A0B4J237 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV8-2A0A0B4J237 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms