Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.12■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.12■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.11■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.11■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 AC098590.1-201ENST00000468126 897 ntBASIC21.11■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.11■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.11■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.11■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.1■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.1■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.1■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.1■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.1■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.1■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.09■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.09■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.09■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.09■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.09■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 MYC-209ENST00000641252 345 ntBASIC21.09■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.08■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.08■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.08■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.08■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.08■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.08■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MSANTD3-TMEFF1A0A0A6YYJ0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.08■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 AC010980.2-201ENST00000587099 1412 ntBASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 POU5F1P4-201ENST00000413175 1085 ntBASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 AC091874.3-201ENST00000512672 1195 ntBASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 AP006294.2-201ENST00000641667 209 ntBASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.06■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 GCSHP5-201ENST00000443090 522 ntBASIC21.06■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 AL158047.1-201ENST00000445918 881 ntBASIC21.06■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.06■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.06■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 AL591742.1-201ENST00000604433 565 ntBASIC21.06■□□□□ 0.96
MSANTD3-TMEFF1A0A0A6YYJ0 AC006058.3-201ENST00000606217 1069 ntBASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms