Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CLUHP3-207ENST00000563678 1303 ntBASIC12.02□□□□□ -0.49
LMO3Q8TAP4 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 DGCR8-202ENST00000383024 4419 ntTSL 5 BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 PSTPIP2-204ENST00000589328 2900 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 PACRG-AS3-202ENST00000612841 1766 ntTSL 2 BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 TAF5L-204ENST00000366676 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 RRP7A-201ENST00000323013 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 ARMC8-204ENST00000461822 2221 ntTSL 2 BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 AKR1C3-209ENST00000605149 1405 ntTSL 2 BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 ARHGAP17-201ENST00000289968 3461 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 PEX12-204ENST00000613219 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LMO3Q8TAP4 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 MCCC2-201ENST00000340941 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 CR769775.4-201ENST00000638516 4139 ntBASIC12.01□□□□□ -0.49
LMO3Q8TAP4 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 ZNF222-201ENST00000187879 1598 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 CXCR1-201ENST00000295683 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 LINC00664-202ENST00000596718 3029 ntTSL 5 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 POLE3-201ENST00000374169 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 FUT2-202ENST00000425340 3111 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 FMO1-201ENST00000354841 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 HDAC9-228ENST00000524023 2199 ntTSL 2 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 AL139274.2-201ENST00000606274 4127 ntBASIC12.01□□□□□ -0.49
LMO3Q8TAP4 PPP6R3-205ENST00000524845 2771 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 KRTAP13-1-201ENST00000355459 749 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 S100A2-204ENST00000368710 453 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 KCNIP1-202ENST00000377360 1197 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 SOD1-202ENST00000389995 865 ntTSL 3 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 IP6K2-208ENST00000417896 1124 ntTSL 2 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 ACTBP1-201ENST00000417985 1113 ntBASIC12.01□□□□□ -0.49
LMO3Q8TAP4 HSPD1P6-202ENST00000424886 571 ntTSL 4 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 CIDECP-205ENST00000433871 770 ntBASIC12.01□□□□□ -0.49
LMO3Q8TAP4 CCDC144NL-AS1-206ENST00000443508 1216 ntTSL 3 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 AL031847.1-201ENST00000455744 378 ntTSL 3 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 AC069454.1-201ENST00000465845 468 ntBASIC12.01□□□□□ -0.49
LMO3Q8TAP4 PARVG-208ENST00000466375 820 ntTSL 2 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 AC021074.1-201ENST00000489462 633 ntBASIC12.01□□□□□ -0.49
LMO3Q8TAP4 PTS-204ENST00000525803 625 ntTSL 3 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 AC079329.1-201ENST00000527288 500 ntTSL 3 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 RAD51-AS1-203ENST00000533146 718 ntTSL 3 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 AC010768.1-201ENST00000533814 543 ntTSL 3 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 GANAB-216ENST00000540933 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 AC010203.2-201ENST00000550886 418 ntTSL 3 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 AC109446.3-201ENST00000567344 641 ntTSL 3 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 TRAPPC2L-214ENST00000568583 801 ntTSL 3 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 RNF215-208ENST00000619645 555 ntBASIC12.01□□□□□ -0.49
LMO3Q8TAP4 UROD-222ENST00000636836 1173 ntTSL 5 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 TRPV2-201ENST00000338560 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 TRUB1-201ENST00000298746 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 MPP4-212ENST00000620095 2364 ntTSL 5 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 CLCC1-201ENST00000302500 1316 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 LINC01588-204ENST00000530176 2444 ntTSL 2 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 GAA-202ENST00000390015 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 DPPA2-201ENST00000478945 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 ATP6V0A1-205ENST00000544137 3047 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 MARCH10-202ENST00000456609 3057 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 RTEL1P1-201ENST00000504490 3685 ntBASIC12.01□□□□□ -0.49
LMO3Q8TAP4 SYNE1-237ENST00000539504 3768 ntTSL 5 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 COIL-201ENST00000240316 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 USP10-219ENST00000570191 2717 ntTSL 2 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 MYPN-203ENST00000373675 2126 ntTSL 2 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
LMO3Q8TAP4 SPRTN-204ENST00000391858 3559 ntTSL 1 (best) BASIC12□□□□□ -0.49
LMO3Q8TAP4 RASGRP4-205ENST00000586305 3061 ntTSL 1 (best) BASIC12□□□□□ -0.49
LMO3Q8TAP4 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
LMO3Q8TAP4 SLC22A8-203ENST00000430500 1744 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LMO3Q8TAP4 AC068299.1-201ENST00000624716 1749 ntBASIC12□□□□□ -0.49
LMO3Q8TAP4 TACC2-206ENST00000368999 3879 ntTSL 5 BASIC12□□□□□ -0.49
LMO3Q8TAP4 UIMC1-212ENST00000511320 2502 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LMO3Q8TAP4 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
LMO3Q8TAP4 ZNF594-202ENST00000575779 4335 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
LMO3Q8TAP4 FGL1-204ENST00000398056 1967 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
LMO3Q8TAP4 KLK8-201ENST00000291726 853 ntTSL 5 BASIC12□□□□□ -0.49
LMO3Q8TAP4 OGFRP1-201ENST00000332965 1242 ntTSL 1 (best) BASIC12□□□□□ -0.49
LMO3Q8TAP4 LST1-203ENST00000339530 635 ntTSL 1 (best) BASIC12□□□□□ -0.49
LMO3Q8TAP4 OR2A42-201ENST00000391496 933 ntAPPRIS P1 BASIC12□□□□□ -0.49
LMO3Q8TAP4 PPIL3-202ENST00000392283 1194 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LMO3Q8TAP4 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC12□□□□□ -0.49
LMO3Q8TAP4 OR2A1-201ENST00000408951 933 ntAPPRIS P1 BASIC12□□□□□ -0.49
LMO3Q8TAP4 PPIL3-204ENST00000409361 897 ntTSL 3 BASIC12□□□□□ -0.49
LMO3Q8TAP4 AC005090.1-201ENST00000433356 575 ntTSL 4 BASIC12□□□□□ -0.49
LMO3Q8TAP4 AL662791.4-201ENST00000445544 317 ntTSL 3 BASIC12□□□□□ -0.49
LMO3Q8TAP4 OR2A9P-203ENST00000484189 933 ntBASIC12□□□□□ -0.49
LMO3Q8TAP4 ATP6V1F-202ENST00000492758 711 ntTSL 2 BASIC12□□□□□ -0.49
LMO3Q8TAP4 OR2A20P-202ENST00000496731 933 ntBASIC12□□□□□ -0.49
LMO3Q8TAP4 SPON1-AS1-201ENST00000534587 240 ntTSL 3 BASIC12□□□□□ -0.49
LMO3Q8TAP4 LINC01405-203ENST00000548368 705 ntTSL 3 BASIC12□□□□□ -0.49
LMO3Q8TAP4 PRR13-208ENST00000549740 786 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
LMO3Q8TAP4 AL121578.3-201ENST00000567273 710 ntTSL 3 BASIC12□□□□□ -0.49
LMO3Q8TAP4 CA5AP1-201ENST00000568175 576 ntBASIC12□□□□□ -0.49
LMO3Q8TAP4 RN7SL644P-201ENST00000577919 259 ntBASIC12□□□□□ -0.49
LMO3Q8TAP4 MIR4459-201ENST00000581837 66 ntBASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms