RNA–Protein interactions for RNA: ENST00000295683.2

CXCR1-201, Transcript of C-X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCR1, Length 2,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR1-201ENST00000295683 NISCHQ9Y2I1 1504 aa23.01■■□□□ 1.27
CXCR1-201ENST00000295683 SHROOM4Q9ULL8 1493 aa19.67■□□□□ 0.74
CXCR1-201ENST00000295683 CCDC180Q9P1Z9 1646 aa19.52■□□□□ 0.72
CXCR1-201ENST00000295683 ZCCHC6Q5VYS8 1495 aaKnown RBP19.46■□□□□ 0.71
CXCR1-201ENST00000295683 SUPT5HO00267 1087 aaKnown RBP19.3■□□□□ 0.68
CXCR1-201ENST00000295683 DCAF8L2P0C7V8 631 aa19.15■□□□□ 0.66
CXCR1-201ENST00000295683 DCAF1Q9Y4B6 1507 aa18.86■□□□□ 0.61
CXCR1-201ENST00000295683 CHIC1Q5VXU3 224 aa18.74■□□□□ 0.59
CXCR1-201ENST00000295683 MYO15BQ96JP2 1530 aa18.65■□□□□ 0.58
CXCR1-201ENST00000295683 ABCC9O60706 1549 aa18.35■□□□□ 0.53
CXCR1-201ENST00000295683 SCRIBQ14160 1630 aa18.34■□□□□ 0.53
CXCR1-201ENST00000295683 RSF1Q96T23 1441 aaPredicted RBP18.23■□□□□ 0.51
CXCR1-201ENST00000295683 LOC105371045A0A1W2PR82 267 aa18.21■□□□□ 0.5
CXCR1-201ENST00000295683 PCGF6Q9BYE7 350 aa18.17■□□□□ 0.5
CXCR1-201ENST00000295683 HRCP23327 699 aa18.15■□□□□ 0.5
CXCR1-201ENST00000295683 NACADO15069 1562 aa18.07■□□□□ 0.48
CXCR1-201ENST00000295683 RB1CC1Q8TDY2 1594 aa18.02■□□□□ 0.48
CXCR1-201ENST00000295683 CECR2Q9BXF3 1484 aa17.98■□□□□ 0.47
CXCR1-201ENST00000295683 TRIM41Q8WV44 630 aa17.96■□□□□ 0.47
CXCR1-201ENST00000295683 MROH2BQ7Z745 1585 aa17.9■□□□□ 0.46
CXCR1-201ENST00000295683 FAM9AQ8IZU1 332 aaPredicted RBP17.84■□□□□ 0.45
CXCR1-201ENST00000295683 TRIM26Q12899 539 aaPredicted RBP17.81■□□□□ 0.44
CXCR1-201ENST00000295683 PPARGC1BQ86YN6 1023 aaKnown RBP17.8■□□□□ 0.44
CXCR1-201ENST00000295683 WIZO95785 1651 aa17.79■□□□□ 0.44
CXCR1-201ENST00000295683 EHMT2Q96KQ7 1210 aa17.7■□□□□ 0.42
CXCR1-201ENST00000295683 BAZ1AQ9NRL2 1556 aaPredicted RBP17.67■□□□□ 0.42
CXCR1-201ENST00000295683 EIF4G1Q04637 1599 aaKnown RBP17.53■□□□□ 0.4
CXCR1-201ENST00000295683 SMARCA4P51532 1647 aa17.51■□□□□ 0.39
CXCR1-201ENST00000295683 TOP2AP11388 1531 aaKnown RBP17.5■□□□□ 0.39
CXCR1-201ENST00000295683 UNC13AQ9UPW8 1703 aa17.49■□□□□ 0.39
CXCR1-201ENST00000295683 CCDC88BA6NC98 1476 aa17.46■□□□□ 0.38
CXCR1-201ENST00000295683 SMARCA2P51531 1590 aa17.42■□□□□ 0.38
CXCR1-201ENST00000295683 ABCC8Q09428 1581 aa17.41■□□□□ 0.38
CXCR1-201ENST00000295683 ZEB1P37275 1124 aaPredicted RBP17.4■□□□□ 0.38
CXCR1-201ENST00000295683 PABPN1Q86U42 306 aaKnown RBP eCLIP17.4■□□□□ 0.38
CXCR1-201ENST00000295683 BICRAQ9NZM4 1560 aa17.31■□□□□ 0.36
CXCR1-201ENST00000295683 SOGA1O94964 1423 aa17.26■□□□□ 0.35
CXCR1-201ENST00000295683 RUSC2Q8N2Y8 1516 aa17.18■□□□□ 0.34
CXCR1-201ENST00000295683 CSRNP3Q8WYN3 585 aa17.18■□□□□ 0.34
CXCR1-201ENST00000295683 CEP162Q5TB80 1403 aa17.17■□□□□ 0.34
CXCR1-201ENST00000295683 PEG3Q9GZU2 1588 aa17.16■□□□□ 0.34
CXCR1-201ENST00000295683 TNIKQ9UKE5 1360 aa17.14■□□□□ 0.34
CXCR1-201ENST00000295683 EEA1Q15075 1411 aa17.14■□□□□ 0.33
CXCR1-201ENST00000295683 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.33
CXCR1-201ENST00000295683 TTBK1Q5TCY1 1321 aaPredicted RBP17.13■□□□□ 0.33
CXCR1-201ENST00000295683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.12■□□□□ 0.33
CXCR1-201ENST00000295683 UBTFP17480 764 aaKnown RBP17.12■□□□□ 0.33
CXCR1-201ENST00000295683 ATAD2BQ9ULI0 1458 aa17.09■□□□□ 0.33
CXCR1-201ENST00000295683 CCER1Q8TC90 406 aaPredicted RBP17.07■□□□□ 0.32
CXCR1-201ENST00000295683 BAZ1BQ9UIG0 1483 aaKnown RBP17.04■□□□□ 0.32
CXCR1-201ENST00000295683 GOLGA3Q08378 1498 aa17.04■□□□□ 0.32
CXCR1-201ENST00000295683 SYNJ1O43426 1573 aa17.02■□□□□ 0.32
CXCR1-201ENST00000295683 CEP164Q9UPV0 1460 aa16.94■□□□□ 0.3
CXCR1-201ENST00000295683 KIF21BO75037 1637 aa16.9■□□□□ 0.3
CXCR1-201ENST00000295683 CLIP1P30622 1438 aa16.86■□□□□ 0.29
CXCR1-201ENST00000295683 RAPGEF2Q9Y4G8 1499 aa16.84■□□□□ 0.29
CXCR1-201ENST00000295683 RANGAP1P46060 587 aaPredicted RBP16.8■□□□□ 0.28
CXCR1-201ENST00000295683 TOP2BQ02880 1626 aa16.8■□□□□ 0.28
CXCR1-201ENST00000295683 VPS8Q8N3P4 1428 aa16.78■□□□□ 0.28
CXCR1-201ENST00000295683 NCAPD3P42695 1498 aa16.75■□□□□ 0.27
CXCR1-201ENST00000295683 HNRNPUL2Q1KMD3 747 aaKnown RBP16.74■□□□□ 0.27
CXCR1-201ENST00000295683 APLP2Q06481 763 aa16.73■□□□□ 0.27
CXCR1-201ENST00000295683 BIVM-ERCC5R4GMW8 1640 aa16.73■□□□□ 0.27
CXCR1-201ENST00000295683 HMGXB3Q12766 1538 aa16.72■□□□□ 0.27
CXCR1-201ENST00000295683 DIEXFQ68CQ4 756 aaKnown RBP16.72■□□□□ 0.27
CXCR1-201ENST00000295683 SCAF1Q9H7N4 1312 aaKnown RBP16.72■□□□□ 0.27
CXCR1-201ENST00000295683 CUX1P39880 1505 aa16.66■□□□□ 0.26
CXCR1-201ENST00000295683 PRXQ9BXM0 1461 aa16.66■□□□□ 0.26
CXCR1-201ENST00000295683 ERICH3Q5RHP9 1530 aa16.63■□□□□ 0.25
CXCR1-201ENST00000295683 CFTRP13569 1480 aa16.62■□□□□ 0.25
CXCR1-201ENST00000295683 KIF27Q86VH2 1401 aa16.59■□□□□ 0.25
CXCR1-201ENST00000295683 ZNF316A6NFI3 1004 aaPredicted RBP16.59■□□□□ 0.25
CXCR1-201ENST00000295683 ARAP1Q96P48 1450 aa16.58■□□□□ 0.24
CXCR1-201ENST00000295683 ACIN1Q9UKV3 1341 aaKnown RBP16.56■□□□□ 0.24
CXCR1-201ENST00000295683 NEUROD1Q13562 356 aa16.56■□□□□ 0.24
CXCR1-201ENST00000295683 KANK4Q5T7N3 995 aaPredicted RBP16.53■□□□□ 0.24
CXCR1-201ENST00000295683 CENPBP07199 599 aaPredicted RBP16.47■□□□□ 0.23
CXCR1-201ENST00000295683 CADPSQ9ULU8 1353 aa16.44■□□□□ 0.22
CXCR1-201ENST00000295683 CUX2O14529 1486 aa16.44■□□□□ 0.22
CXCR1-201ENST00000295683 ARHGAP35Q9NRY4 1499 aa16.44■□□□□ 0.22
CXCR1-201ENST00000295683 IGF1RP08069 1367 aa16.42■□□□□ 0.22
CXCR1-201ENST00000295683 PRDM2Q13029 1718 aa16.4■□□□□ 0.22
CXCR1-201ENST00000295683 DHX57Q6P158 1386 aaKnown RBP16.39■□□□□ 0.21
CXCR1-201ENST00000295683 GTF3C3Q9Y5Q9 886 aa16.38■□□□□ 0.21
CXCR1-201ENST00000295683 RRBP1Q9P2E9 1410 aaKnown RBP16.38■□□□□ 0.21
CXCR1-201ENST00000295683 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
CXCR1-201ENST00000295683 MIER1Q8N108 512 aa16.37■□□□□ 0.21
CXCR1-201ENST00000295683 CARMIL1Q5VZK9 1371 aa16.36■□□□□ 0.21
CXCR1-201ENST00000295683 CLSPNQ9HAW4 1339 aa16.35■□□□□ 0.21
CXCR1-201ENST00000295683 YTHDC1Q96MU7 727 aaKnown RBP16.35■□□□□ 0.21
CXCR1-201ENST00000295683 CCNB3Q8WWL7 1395 aa16.33■□□□□ 0.2
CXCR1-201ENST00000295683 CC2D2AQ9P2K1 1620 aa16.32■□□□□ 0.2
CXCR1-201ENST00000295683 ITGAEP38570 1179 aa16.31■□□□□ 0.2
CXCR1-201ENST00000295683 PELP1Q8IZL8 1130 aaKnown RBP16.29■□□□□ 0.2
CXCR1-201ENST00000295683 FANCD2Q9BXW9 1451 aa16.28■□□□□ 0.2
CXCR1-201ENST00000295683 TIAM1Q13009 1591 aa16.24■□□□□ 0.19
CXCR1-201ENST00000295683 P3H3Q8IVL6 736 aa16.24■□□□□ 0.19
CXCR1-201ENST00000295683 RAD54L2Q9Y4B4 1467 aa16.22■□□□□ 0.19
CXCR1-201ENST00000295683 MAP3K1Q13233 1512 aa16.21■□□□□ 0.19
CXCR1-201ENST00000295683 LRRC9Q6ZRR7 1453 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms