Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC016894.1-201ENST00000444364 311 ntBASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 MARK3P3-201ENST00000484446 727 ntBASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 AC004923.4-201ENST00000532296 739 ntTSL 3 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 DBI-209ENST00000535757 740 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 RPL12-205ENST00000536368 499 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 KRTAP2-1-202ENST00000542137 375 ntTSL 5 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 MYL6B-207ENST00000550443 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 MYL6B-210ENST00000552568 703 ntTSL 5 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 ZCRB1-205ENST00000552673 907 ntTSL 3 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 AC010551.1-201ENST00000568458 469 ntTSL 4 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 ALOX12-AS1-203ENST00000570562 567 ntTSL 3 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 B9D1-213ENST00000575403 928 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 RN7SL488P-201ENST00000585186 286 ntBASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 MAP3K14-AS1-207ENST00000588698 460 ntTSL 4 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 ZRANB2-207ENST00000611683 1257 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 BACH1-AS1-202ENST00000615718 700 ntTSL 5 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 GAGE2E-201ENST00000621907 403 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 AC007493.1-201ENST00000637635 683 ntTSL 5 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 PABPC1P11-201ENST00000428966 2007 ntBASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 CADM2-201ENST00000383699 9488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 AL390728.2-201ENST00000400933 1670 ntBASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 CAMK1G-202ENST00000361322 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 FBP2-201ENST00000375337 1305 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 TNNT2-224ENST00000509001 1330 ntAPPRIS P4 TSL 5 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 EDNRB-202ENST00000377211 4471 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 LRRC41-207ENST00000617190 4128 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 MKRN7P-202ENST00000640520 1765 ntTSL 5 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 USP14-202ENST00000383589 2168 ntTSL 5 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 LINC00969-212ENST00000445430 4208 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 CACNA1E-206ENST00000367573 7067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 RTN3-204ENST00000354497 1407 ntTSL 2 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 CLCN6-202ENST00000346436 5583 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 TRIM23-203ENST00000381018 1855 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 MAP3K13-210ENST00000446828 2737 ntTSL 2 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 OTOF-205ENST00000403946 6937 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 AC011899.1-201ENST00000436489 3600 ntTSL 2 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 ETFDH-201ENST00000307738 1903 ntTSL 2 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 THUMPD1-201ENST00000381337 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 ACTR1A-201ENST00000369905 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 DFNB59-202ENST00000409117 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 AC092447.8-201ENST00000566570 4162 ntBASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 INS-IGF2-205ENST00000641326 2861 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 UBASH3A-201ENST00000291535 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 SRRT-215ENST00000614484 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 AC011466.4-201ENST00000623064 1614 ntBASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 USP5-202ENST00000389231 3083 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 CHMP1B-201ENST00000526991 3054 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 BAG6-235ENST00000362049 3626 ntTSL 2 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 FAM78A-202ENST00000372269 3659 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 OPRM1-204ENST00000360422 1737 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 AC007365.3-202ENST00000417695 1722 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 STIL-202ENST00000360380 5225 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 ERCC1-202ENST00000300853 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 COA3-201ENST00000328434 771 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 IGLV2-11-201ENST00000390314 400 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 HSPD1P6-202ENST00000424886 571 ntTSL 4 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 AC002472.1-201ENST00000450652 563 ntTSL 4 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 AL354707.1-204ENST00000451142 846 ntTSL 2 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 AC099541.1-201ENST00000453828 670 ntTSL 2 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 DLEU1-208ENST00000468168 982 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 C21orf62-203ENST00000487113 1009 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 AC008694.1-201ENST00000522076 428 ntTSL 2 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 AC074032.1-201ENST00000548468 698 ntTSL 3 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 AL117694.1-201ENST00000555136 300 ntBASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 AC068722.1-201ENST00000560705 861 ntTSL 3 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 RAB11A-204ENST00000565075 711 ntTSL 2 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 KRT18P18-201ENST00000565278 1279 ntBASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 AC011773.4-202ENST00000566000 1264 ntBASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 MIR4721-201ENST00000577590 89 ntBASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 AP003028.1-201ENST00000577699 1033 ntTSL 5 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 RN7SL644P-201ENST00000577919 259 ntBASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 AC090772.3-201ENST00000583267 735 ntTSL 3 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 NAMA-205ENST00000605043 551 ntTSL 5 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 AC089987.1-202ENST00000641959 426 ntBASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 ATAD3C-201ENST00000378785 3859 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 LINC02003-201ENST00000577573 1833 ntTSL 2 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 NLRC3-201ENST00000324659 3414 ntTSL 5 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 TMEM18-202ENST00000355654 2376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 ANXA3-209ENST00000512884 1335 ntTSL 5 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 EFTUD2-202ENST00000426333 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 CMIP-211ENST00000621537 4000 ntTSL 5 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 PKD2L1-201ENST00000318222 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 STAU1-203ENST00000360426 3211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 CASQ2-201ENST00000261448 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 ABR-201ENST00000291107 2673 ntTSL 2 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 RYR1-201ENST00000355481 15377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 CDKL3-201ENST00000265334 2130 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 ZNF423-201ENST00000262383 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 ZNF610-201ENST00000321287 2150 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 ARSJ-201ENST00000315366 4657 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 GTPBP2-201ENST00000307114 2830 ntTSL 2 BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 SORBS2-203ENST00000319471 2824 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 LINC02211-203ENST00000642022 2816 ntBASIC10.48□□□□□ -0.73
NPIPA3F8WFD2 C22orf23-201ENST00000249079 1560 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms