Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC00454-201ENST00000425483 503 ntTSL 3 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 AL590302.2-201ENST00000435810 1122 ntTSL 5 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 ACP1-207ENST00000439645 605 ntTSL 2 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 COX7CP1-201ENST00000446556 192 ntBASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 DPY19L2P1-202ENST00000454445 2909 ntBASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 AC122683.1-201ENST00000456335 717 ntTSL 3 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 LSP1P2-201ENST00000479042 133 ntBASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 TUBB8P3-201ENST00000510182 803 ntBASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 CR545473.1-201ENST00000511554 277 ntBASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 NDUFS8-210ENST00000528492 353 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 RAP1GAP2-203ENST00000540393 3218 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 AC023824.6-201ENST00000565523 703 ntTSL 2 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 AL121578.3-201ENST00000567273 710 ntTSL 3 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 MIR4686-201ENST00000584128 76 ntBASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 TEX26-AS1-206ENST00000586464 851 ntTSL 5 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 LINC00539-204ENST00000608957 869 ntTSL 5 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 LINC02255-201ENST00000619758 199 ntTSL 5 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 AC084337.2-202ENST00000640959 595 ntAPPRIS P5 TSL 4 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 PEX5L-201ENST00000263962 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 TP53-204ENST00000420246 2653 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 TP53-227ENST00000622645 2653 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 AC113208.3-201ENST00000637356 2523 ntBASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 ZNF319-201ENST00000299237 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 TGS1-201ENST00000260129 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 TRIM40-205ENST00000307859 1640 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 KIAA1671-201ENST00000358431 10490 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 LINC-PINT-208ENST00000451786 3505 ntTSL 2 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 C1RL-AS1-205ENST00000541775 5272 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 AC010210.1-201ENST00000502521 1978 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 JADE1-213ENST00000610919 5644 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 CADM3-202ENST00000368125 3745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 AL606534.6-201ENST00000611420 1838 ntBASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 YOD1-201ENST00000315927 6265 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 ABCC12-201ENST00000311303 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 PIP5K1P1-201ENST00000460661 1656 ntBASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 SPIN2A-202ENST00000374908 2468 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 ACACB-201ENST00000338432 9360 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 WDR82-201ENST00000296490 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 RPS24-204ENST00000440692 2814 ntTSL 3 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 CACNA1C-201ENST00000327702 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 ALDOC-203ENST00000395321 1722 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 ACVR1-207ENST00000434821 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 AL136295.4-201ENST00000561419 4351 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 SYNJ2-201ENST00000355585 7378 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 PALM2-204ENST00000483909 1418 ntTSL 2 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 ETFDH-206ENST00000511912 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 PMEPA1-201ENST00000265626 4627 ntTSL 3 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 UGDH-AS1-201ENST00000504032 2787 ntTSL 2 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 AL354919.1-201ENST00000453837 2257 ntTSL 2 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 LINC00951-201ENST00000373171 554 ntTSL 2 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 APOBEC3F-202ENST00000381565 616 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 KRTAP2-1-201ENST00000391419 776 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 RPL23-204ENST00000394333 444 ntTSL 2 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 RPL23P8-201ENST00000405810 428 ntBASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 AC073254.1-201ENST00000415506 1162 ntTSL 5 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 SWI5-204ENST00000419867 1048 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 HNRNPA1P49-201ENST00000421336 904 ntBASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 AC004980.2-201ENST00000423648 497 ntBASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 RPL36P20-201ENST00000423702 319 ntBASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 MRPL45P2-201ENST00000425159 927 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 AL117382.1-201ENST00000438702 754 ntTSL 5 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 GSTK1-205ENST00000443571 850 ntTSL 2 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 AC016735.1-201ENST00000457457 237 ntTSL 2 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 RN7SL831P-201ENST00000460344 319 ntBASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 RN7SL60P-201ENST00000476209 299 ntBASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 RN7SL79P-201ENST00000484117 290 ntBASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 RN7SL617P-201ENST00000485298 308 ntBASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 ATP5G1-204ENST00000503641 539 ntTSL 3 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 LINC01950-201ENST00000505997 602 ntTSL 3 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 AP000842.1-201ENST00000524467 698 ntBASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 PSME1-210ENST00000561435 945 ntTSL 2 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 AC073254.1-213ENST00000596622 704 ntTSL 5 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 AC073254.1-211ENST00000598700 761 ntTSL 5 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 FP700107.1-201ENST00000615237 1178 ntBASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 AL121832.1-204ENST00000622414 548 ntTSL 3 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 AL356585.3-201ENST00000625196 1017 ntBASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 PGM2-206ENST00000625312 661 ntTSL 2 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 AFF4-203ENST00000378595 3348 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 FOSB-202ENST00000417353 3667 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 SLC12A3-202ENST00000438926 5567 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 ZC3HC1-202ENST00000358303 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 GLP2R-201ENST00000262441 4572 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 SLC38A11-201ENST00000303735 3737 ntTSL 2 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 ZNF248-203ENST00000395867 5141 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 PEX5L-213ENST00000476138 2361 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 FCHO1-208ENST00000595033 2907 ntTSL 2 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 UBE2D3-209ENST00000394804 4166 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 DUSP27-203ENST00000443333 4034 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 RIMKLB-213ENST00000619374 1519 ntTSL 5 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 TMEM164-201ENST00000288381 5452 ntTSL 5 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 WWC2-204ENST00000448232 6356 ntTSL 5 BASIC10.53□□□□□ -0.72
NPIPA3F8WFD2 KCNH7-201ENST00000328032 2434 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 406.2 ms