Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC24.33■■□□□ 1.49
PTCH2Q9Y6C5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC24.33■■□□□ 1.49
PTCH2Q9Y6C5 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PTCH2Q9Y6C5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PTCH2Q9Y6C5 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PTCH2Q9Y6C5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PTCH2Q9Y6C5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.33■■□□□ 1.49
PTCH2Q9Y6C5 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PTCH2Q9Y6C5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
PTCH2Q9Y6C5 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
PTCH2Q9Y6C5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC24.33■■□□□ 1.48
PTCH2Q9Y6C5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
PTCH2Q9Y6C5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PTCH2Q9Y6C5 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PTCH2Q9Y6C5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PTCH2Q9Y6C5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PTCH2Q9Y6C5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.32■■□□□ 1.48
PTCH2Q9Y6C5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PTCH2Q9Y6C5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
PTCH2Q9Y6C5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PTCH2Q9Y6C5 MIR718-201ENST00000390190 70 ntBASIC24.32■■□□□ 1.48
PTCH2Q9Y6C5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PTCH2Q9Y6C5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC24.32■■□□□ 1.48
PTCH2Q9Y6C5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC24.32■■□□□ 1.48
PTCH2Q9Y6C5 EEF1DP3-203ENST00000566025 782 ntBASIC24.32■■□□□ 1.48
PTCH2Q9Y6C5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC24.32■■□□□ 1.48
PTCH2Q9Y6C5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
PTCH2Q9Y6C5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PTCH2Q9Y6C5 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PTCH2Q9Y6C5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PTCH2Q9Y6C5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.31■■□□□ 1.48
PTCH2Q9Y6C5 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PTCH2Q9Y6C5 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PTCH2Q9Y6C5 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PTCH2Q9Y6C5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PTCH2Q9Y6C5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PTCH2Q9Y6C5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
PTCH2Q9Y6C5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC24.31■■□□□ 1.48
PTCH2Q9Y6C5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC24.31■■□□□ 1.48
PTCH2Q9Y6C5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PTCH2Q9Y6C5 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PTCH2Q9Y6C5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
PTCH2Q9Y6C5 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PTCH2Q9Y6C5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.3■■□□□ 1.48
PTCH2Q9Y6C5 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PTCH2Q9Y6C5 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.3■■□□□ 1.48
PTCH2Q9Y6C5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
PTCH2Q9Y6C5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PTCH2Q9Y6C5 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC24.3■■□□□ 1.48
PTCH2Q9Y6C5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC24.3■■□□□ 1.48
PTCH2Q9Y6C5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.3■■□□□ 1.48
PTCH2Q9Y6C5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.3■■□□□ 1.48
PTCH2Q9Y6C5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC24.3■■□□□ 1.48
PTCH2Q9Y6C5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.3■■□□□ 1.48
PTCH2Q9Y6C5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PTCH2Q9Y6C5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
PTCH2Q9Y6C5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PTCH2Q9Y6C5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PTCH2Q9Y6C5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC24.29■■□□□ 1.48
PTCH2Q9Y6C5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC24.29■■□□□ 1.48
PTCH2Q9Y6C5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC24.29■■□□□ 1.48
PTCH2Q9Y6C5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PTCH2Q9Y6C5 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.29■■□□□ 1.48
PTCH2Q9Y6C5 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PTCH2Q9Y6C5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PTCH2Q9Y6C5 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PTCH2Q9Y6C5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PTCH2Q9Y6C5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PTCH2Q9Y6C5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PTCH2Q9Y6C5 SERPINH1P1-201ENST00000419794 1249 ntBASIC24.28■■□□□ 1.48
PTCH2Q9Y6C5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC24.28■■□□□ 1.48
PTCH2Q9Y6C5 REXO1L12P-201ENST00000622156 912 ntBASIC24.28■■□□□ 1.48
PTCH2Q9Y6C5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC24.28■■□□□ 1.48
PTCH2Q9Y6C5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PTCH2Q9Y6C5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.27■■□□□ 1.48
PTCH2Q9Y6C5 AP004607.7-201ENST00000527152 1677 ntBASIC24.27■■□□□ 1.48
PTCH2Q9Y6C5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PTCH2Q9Y6C5 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCH2Q9Y6C5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCH2Q9Y6C5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCH2Q9Y6C5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PTCH2Q9Y6C5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PTCH2Q9Y6C5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC24.27■■□□□ 1.48
PTCH2Q9Y6C5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC24.27■■□□□ 1.48
PTCH2Q9Y6C5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
PTCH2Q9Y6C5 AC053503.5-201ENST00000601508 636 ntBASIC24.27■■□□□ 1.48
PTCH2Q9Y6C5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC24.27■■□□□ 1.48
PTCH2Q9Y6C5 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCH2Q9Y6C5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.26■■□□□ 1.47
PTCH2Q9Y6C5 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.26■■□□□ 1.47
PTCH2Q9Y6C5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PTCH2Q9Y6C5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PTCH2Q9Y6C5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.26■■□□□ 1.47
PTCH2Q9Y6C5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PTCH2Q9Y6C5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PTCH2Q9Y6C5 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC24.26■■□□□ 1.47
PTCH2Q9Y6C5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC24.26■■□□□ 1.47
PTCH2Q9Y6C5 AC008403.3-201ENST00000598924 454 ntBASIC24.26■■□□□ 1.47
PTCH2Q9Y6C5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PTCH2Q9Y6C5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms