Protein–RNA interactions for Protein: Q9Y5X3

SNX5, Sorting nexin-5, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5Q9Y5X3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SNX5Q9Y5X3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.66■□□□□ 0.74
SNX5Q9Y5X3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.66■□□□□ 0.74
SNX5Q9Y5X3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SNX5Q9Y5X3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX5Q9Y5X3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX5Q9Y5X3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX5Q9Y5X3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX5Q9Y5X3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX5Q9Y5X3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX5Q9Y5X3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.66■□□□□ 0.74
SNX5Q9Y5X3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX5Q9Y5X3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX5Q9Y5X3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.66■□□□□ 0.74
SNX5Q9Y5X3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX5Q9Y5X3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX5Q9Y5X3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.65■□□□□ 0.74
SNX5Q9Y5X3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX5Q9Y5X3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX5Q9Y5X3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.65■□□□□ 0.74
SNX5Q9Y5X3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.65■□□□□ 0.74
SNX5Q9Y5X3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX5Q9Y5X3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.65■□□□□ 0.74
SNX5Q9Y5X3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX5Q9Y5X3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX5Q9Y5X3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX5Q9Y5X3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX5Q9Y5X3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX5Q9Y5X3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.65■□□□□ 0.74
SNX5Q9Y5X3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX5Q9Y5X3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
SNX5Q9Y5X3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
SNX5Q9Y5X3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.64■□□□□ 0.74
SNX5Q9Y5X3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SNX5Q9Y5X3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.64■□□□□ 0.74
SNX5Q9Y5X3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.64■□□□□ 0.73
SNX5Q9Y5X3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX5Q9Y5X3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.64■□□□□ 0.73
SNX5Q9Y5X3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.64■□□□□ 0.73
SNX5Q9Y5X3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SNX5Q9Y5X3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX5Q9Y5X3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX5Q9Y5X3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX5Q9Y5X3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.64■□□□□ 0.73
SNX5Q9Y5X3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNX5Q9Y5X3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX5Q9Y5X3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX5Q9Y5X3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SNX5Q9Y5X3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SNX5Q9Y5X3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 MIR4508-201ENST00000584178 70 ntBASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNX5Q9Y5X3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX5Q9Y5X3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX5Q9Y5X3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX5Q9Y5X3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX5Q9Y5X3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.62■□□□□ 0.73
SNX5Q9Y5X3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX5Q9Y5X3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX5Q9Y5X3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SNX5Q9Y5X3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX5Q9Y5X3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX5Q9Y5X3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX5Q9Y5X3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SNX5Q9Y5X3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX5Q9Y5X3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX5Q9Y5X3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.62■□□□□ 0.73
SNX5Q9Y5X3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX5Q9Y5X3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX5Q9Y5X3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.61■□□□□ 0.73
SNX5Q9Y5X3 FEM1AP1-201ENST00000431297 1995 ntBASIC19.61■□□□□ 0.73
SNX5Q9Y5X3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX5Q9Y5X3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SNX5Q9Y5X3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX5Q9Y5X3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX5Q9Y5X3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX5Q9Y5X3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SNX5Q9Y5X3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX5Q9Y5X3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX5Q9Y5X3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX5Q9Y5X3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
SNX5Q9Y5X3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms