Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 BX842568.3-201ENST00000418104 571 ntBASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 AC010141.3-201ENST00000456659 717 ntBASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHGB3Q9Y5G1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB3Q9Y5G1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PCDHGB3Q9Y5G1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGB3Q9Y5G1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB3Q9Y5G1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PCDHGB3Q9Y5G1 AP005435.1-201ENST00000529293 1178 ntBASIC20.16■□□□□ 0.82
PCDHGB3Q9Y5G1 AC233992.3-201ENST00000607491 485 ntBASIC20.16■□□□□ 0.82
PCDHGB3Q9Y5G1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB3Q9Y5G1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB3Q9Y5G1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB3Q9Y5G1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB3Q9Y5G1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGB3Q9Y5G1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB3Q9Y5G1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB3Q9Y5G1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB3Q9Y5G1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB3Q9Y5G1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB3Q9Y5G1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PCDHGB3Q9Y5G1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB3Q9Y5G1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB3Q9Y5G1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB3Q9Y5G1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PCDHGB3Q9Y5G1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB3Q9Y5G1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB3Q9Y5G1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHGB3Q9Y5G1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PCDHGB3Q9Y5G1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGB3Q9Y5G1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHGB3Q9Y5G1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHGB3Q9Y5G1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB3Q9Y5G1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
PCDHGB3Q9Y5G1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PCDHGB3Q9Y5G1 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.15■□□□□ 0.82
PCDHGB3Q9Y5G1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB3Q9Y5G1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB3Q9Y5G1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCDHGB3Q9Y5G1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB3Q9Y5G1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PCDHGB3Q9Y5G1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB3Q9Y5G1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PCDHGB3Q9Y5G1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB3Q9Y5G1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB3Q9Y5G1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB3Q9Y5G1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB3Q9Y5G1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDHGB3Q9Y5G1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDHGB3Q9Y5G1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB3Q9Y5G1 RARRES2P6-201ENST00000567333 442 ntBASIC20.14■□□□□ 0.81
PCDHGB3Q9Y5G1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDHGB3Q9Y5G1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB3Q9Y5G1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB3Q9Y5G1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB3Q9Y5G1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB3Q9Y5G1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB3Q9Y5G1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB3Q9Y5G1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB3Q9Y5G1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB3Q9Y5G1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB3Q9Y5G1 OR7E47P-201ENST00000546390 1422 ntBASIC20.13■□□□□ 0.81
PCDHGB3Q9Y5G1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB3Q9Y5G1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHGB3Q9Y5G1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
PCDHGB3Q9Y5G1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGB3Q9Y5G1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB3Q9Y5G1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDHGB3Q9Y5G1 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.13■□□□□ 0.81
PCDHGB3Q9Y5G1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB3Q9Y5G1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB3Q9Y5G1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB3Q9Y5G1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB3Q9Y5G1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB3Q9Y5G1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGB3Q9Y5G1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB3Q9Y5G1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB3Q9Y5G1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB3Q9Y5G1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.12■□□□□ 0.81
PCDHGB3Q9Y5G1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PCDHGB3Q9Y5G1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGB3Q9Y5G1 AC099791.1-201ENST00000416440 715 ntBASIC20.12■□□□□ 0.81
PCDHGB3Q9Y5G1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PCDHGB3Q9Y5G1 AC010525.1-201ENST00000585559 441 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms