Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RNF11Q9Y3C5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF11Q9Y3C5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF11Q9Y3C5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF11Q9Y3C5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF11Q9Y3C5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF11Q9Y3C5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RNF11Q9Y3C5 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.77■□□□□ 0.92
RNF11Q9Y3C5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.77■□□□□ 0.92
RNF11Q9Y3C5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF11Q9Y3C5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF11Q9Y3C5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.77■□□□□ 0.92
RNF11Q9Y3C5 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF11Q9Y3C5 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.77■□□□□ 0.92
RNF11Q9Y3C5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF11Q9Y3C5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.77■□□□□ 0.91
RNF11Q9Y3C5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.91
RNF11Q9Y3C5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RNF11Q9Y3C5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF11Q9Y3C5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF11Q9Y3C5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RNF11Q9Y3C5 AC008406.3-201ENST00000620001 1374 ntBASIC20.76■□□□□ 0.91
RNF11Q9Y3C5 AC092667.1-201ENST00000434301 2586 ntBASIC20.76■□□□□ 0.91
RNF11Q9Y3C5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF11Q9Y3C5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF11Q9Y3C5 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RNF11Q9Y3C5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF11Q9Y3C5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF11Q9Y3C5 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF11Q9Y3C5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF11Q9Y3C5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF11Q9Y3C5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF11Q9Y3C5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF11Q9Y3C5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF11Q9Y3C5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF11Q9Y3C5 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF11Q9Y3C5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF11Q9Y3C5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF11Q9Y3C5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF11Q9Y3C5 BX842568.3-201ENST00000418104 571 ntBASIC20.75■□□□□ 0.91
RNF11Q9Y3C5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RNF11Q9Y3C5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF11Q9Y3C5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RNF11Q9Y3C5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF11Q9Y3C5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF11Q9Y3C5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RNF11Q9Y3C5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF11Q9Y3C5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RNF11Q9Y3C5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF11Q9Y3C5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF11Q9Y3C5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF11Q9Y3C5 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF11Q9Y3C5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF11Q9Y3C5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF11Q9Y3C5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF11Q9Y3C5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF11Q9Y3C5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF11Q9Y3C5 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF11Q9Y3C5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RNF11Q9Y3C5 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF11Q9Y3C5 AC135279.3-201ENST00000610945 1311 ntBASIC20.74■□□□□ 0.91
RNF11Q9Y3C5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF11Q9Y3C5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF11Q9Y3C5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF11Q9Y3C5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF11Q9Y3C5 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF11Q9Y3C5 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF11Q9Y3C5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF11Q9Y3C5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF11Q9Y3C5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF11Q9Y3C5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF11Q9Y3C5 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF11Q9Y3C5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF11Q9Y3C5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF11Q9Y3C5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF11Q9Y3C5 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF11Q9Y3C5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF11Q9Y3C5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF11Q9Y3C5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF11Q9Y3C5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF11Q9Y3C5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF11Q9Y3C5 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF11Q9Y3C5 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF11Q9Y3C5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF11Q9Y3C5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.72■□□□□ 0.91
RNF11Q9Y3C5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.72■□□□□ 0.91
RNF11Q9Y3C5 AC096631.2-201ENST00000436136 790 ntBASIC20.72■□□□□ 0.91
RNF11Q9Y3C5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.72■□□□□ 0.91
RNF11Q9Y3C5 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF11Q9Y3C5 AC233992.3-201ENST00000607491 485 ntBASIC20.72■□□□□ 0.91
RNF11Q9Y3C5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF11Q9Y3C5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF11Q9Y3C5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RNF11Q9Y3C5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF11Q9Y3C5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms