Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC26.09■■□□□ 1.77
ZC3H4Q9UPT8 EEF1DP3-203ENST00000566025 782 ntBASIC26.09■■□□□ 1.77
ZC3H4Q9UPT8 REXO1L12P-201ENST00000622156 912 ntBASIC26.09■■□□□ 1.77
ZC3H4Q9UPT8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ZC3H4Q9UPT8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ZC3H4Q9UPT8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.08■■□□□ 1.77
ZC3H4Q9UPT8 AC079630.1-202ENST00000618127 1840 ntBASIC26.08■■□□□ 1.77
ZC3H4Q9UPT8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ZC3H4Q9UPT8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ZC3H4Q9UPT8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ZC3H4Q9UPT8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ZC3H4Q9UPT8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ZC3H4Q9UPT8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ZC3H4Q9UPT8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ZC3H4Q9UPT8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC26.08■■□□□ 1.77
ZC3H4Q9UPT8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC26.08■■□□□ 1.77
ZC3H4Q9UPT8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC26.08■■□□□ 1.77
ZC3H4Q9UPT8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
ZC3H4Q9UPT8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC26.07■■□□□ 1.76
ZC3H4Q9UPT8 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
ZC3H4Q9UPT8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.07■■□□□ 1.76
ZC3H4Q9UPT8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ZC3H4Q9UPT8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ZC3H4Q9UPT8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
ZC3H4Q9UPT8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
ZC3H4Q9UPT8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC26.07■■□□□ 1.76
ZC3H4Q9UPT8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC26.07■■□□□ 1.76
ZC3H4Q9UPT8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ZC3H4Q9UPT8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.07■■□□□ 1.76
ZC3H4Q9UPT8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.07■■□□□ 1.76
ZC3H4Q9UPT8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
ZC3H4Q9UPT8 DUSP8P5-201ENST00000422884 1815 ntBASIC26.06■■□□□ 1.76
ZC3H4Q9UPT8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC26.06■■□□□ 1.76
ZC3H4Q9UPT8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
ZC3H4Q9UPT8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ZC3H4Q9UPT8 DUSP8P3-201ENST00000399571 1760 ntBASIC26.06■■□□□ 1.76
ZC3H4Q9UPT8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ZC3H4Q9UPT8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ZC3H4Q9UPT8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC26.06■■□□□ 1.76
ZC3H4Q9UPT8 SERPINH1P1-201ENST00000419794 1249 ntBASIC26.06■■□□□ 1.76
ZC3H4Q9UPT8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC26.06■■□□□ 1.76
ZC3H4Q9UPT8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ZC3H4Q9UPT8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ZC3H4Q9UPT8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
ZC3H4Q9UPT8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ZC3H4Q9UPT8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.05■■□□□ 1.76
ZC3H4Q9UPT8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ZC3H4Q9UPT8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC26.05■■□□□ 1.76
ZC3H4Q9UPT8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.05■■□□□ 1.76
ZC3H4Q9UPT8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
ZC3H4Q9UPT8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
ZC3H4Q9UPT8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.04■■□□□ 1.76
ZC3H4Q9UPT8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ZC3H4Q9UPT8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC26.04■■□□□ 1.76
ZC3H4Q9UPT8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC26.04■■□□□ 1.76
ZC3H4Q9UPT8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC26.04■■□□□ 1.76
ZC3H4Q9UPT8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC26.04■■□□□ 1.76
ZC3H4Q9UPT8 AC053503.5-201ENST00000601508 636 ntBASIC26.04■■□□□ 1.76
ZC3H4Q9UPT8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ZC3H4Q9UPT8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
ZC3H4Q9UPT8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
ZC3H4Q9UPT8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ZC3H4Q9UPT8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
ZC3H4Q9UPT8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
ZC3H4Q9UPT8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.03■■□□□ 1.76
ZC3H4Q9UPT8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
ZC3H4Q9UPT8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ZC3H4Q9UPT8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ZC3H4Q9UPT8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC26.02■■□□□ 1.76
ZC3H4Q9UPT8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC26.02■■□□□ 1.76
ZC3H4Q9UPT8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC26.02■■□□□ 1.76
ZC3H4Q9UPT8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ZC3H4Q9UPT8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC26.02■■□□□ 1.76
ZC3H4Q9UPT8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC26.02■■□□□ 1.76
ZC3H4Q9UPT8 AC008403.3-201ENST00000598924 454 ntBASIC26.02■■□□□ 1.76
ZC3H4Q9UPT8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC26.02■■□□□ 1.76
ZC3H4Q9UPT8 FAM197Y4-202ENST00000622692 608 ntBASIC26.02■■□□□ 1.76
ZC3H4Q9UPT8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ZC3H4Q9UPT8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
ZC3H4Q9UPT8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ZC3H4Q9UPT8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ZC3H4Q9UPT8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
ZC3H4Q9UPT8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.01■■□□□ 1.75
ZC3H4Q9UPT8 RPPH1-201ENST00000516869 333 ntBASIC26.01■■□□□ 1.75
ZC3H4Q9UPT8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC26.01■■□□□ 1.75
ZC3H4Q9UPT8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC26.01■■□□□ 1.75
ZC3H4Q9UPT8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
ZC3H4Q9UPT8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC26.01■■□□□ 1.75
ZC3H4Q9UPT8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC26.01■■□□□ 1.75
ZC3H4Q9UPT8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ZC3H4Q9UPT8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26■■□□□ 1.75
ZC3H4Q9UPT8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ZC3H4Q9UPT8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ZC3H4Q9UPT8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26■■□□□ 1.75
ZC3H4Q9UPT8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC26■■□□□ 1.75
ZC3H4Q9UPT8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC26■■□□□ 1.75
ZC3H4Q9UPT8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC26■■□□□ 1.75
ZC3H4Q9UPT8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
ZC3H4Q9UPT8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
ZC3H4Q9UPT8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms