Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSR3Q9UNL2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
SSR3Q9UNL2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.99■□□□□ 0.63
SSR3Q9UNL2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.99■□□□□ 0.63
SSR3Q9UNL2 KRT18P24-201ENST00000344739 1156 ntBASIC18.99■□□□□ 0.63
SSR3Q9UNL2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSR3Q9UNL2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.99■□□□□ 0.63
SSR3Q9UNL2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSR3Q9UNL2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSR3Q9UNL2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSR3Q9UNL2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSR3Q9UNL2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SSR3Q9UNL2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSR3Q9UNL2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSR3Q9UNL2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSR3Q9UNL2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SSR3Q9UNL2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SSR3Q9UNL2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SSR3Q9UNL2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSR3Q9UNL2 AC139795.1-202ENST00000500444 432 ntBASIC18.97■□□□□ 0.63
SSR3Q9UNL2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.97■□□□□ 0.63
SSR3Q9UNL2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.97■□□□□ 0.63
SSR3Q9UNL2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.97■□□□□ 0.63
SSR3Q9UNL2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSR3Q9UNL2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSR3Q9UNL2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSR3Q9UNL2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSR3Q9UNL2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSR3Q9UNL2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.96■□□□□ 0.63
SSR3Q9UNL2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
SSR3Q9UNL2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSR3Q9UNL2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSR3Q9UNL2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSR3Q9UNL2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.95■□□□□ 0.62
SSR3Q9UNL2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSR3Q9UNL2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSR3Q9UNL2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSR3Q9UNL2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSR3Q9UNL2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.95■□□□□ 0.62
SSR3Q9UNL2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSR3Q9UNL2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSR3Q9UNL2 AC129492.7-201ENST00000622992 756 ntBASIC18.95■□□□□ 0.62
SSR3Q9UNL2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSR3Q9UNL2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
SSR3Q9UNL2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SSR3Q9UNL2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSR3Q9UNL2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.95■□□□□ 0.62
SSR3Q9UNL2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSR3Q9UNL2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SSR3Q9UNL2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSR3Q9UNL2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SSR3Q9UNL2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.94■□□□□ 0.62
SSR3Q9UNL2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SSR3Q9UNL2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.94■□□□□ 0.62
SSR3Q9UNL2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms