Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.3■■□□□ 1.48
COL20A1Q9P218 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC24.3■■□□□ 1.48
COL20A1Q9P218 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC24.29■■□□□ 1.48
COL20A1Q9P218 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL20A1Q9P218 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL20A1Q9P218 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL20A1Q9P218 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL20A1Q9P218 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL20A1Q9P218 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.29■■□□□ 1.48
COL20A1Q9P218 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC24.29■■□□□ 1.48
COL20A1Q9P218 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.29■■□□□ 1.48
COL20A1Q9P218 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
COL20A1Q9P218 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.29■■□□□ 1.48
COL20A1Q9P218 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
COL20A1Q9P218 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC24.29■■□□□ 1.48
COL20A1Q9P218 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.29■■□□□ 1.48
COL20A1Q9P218 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.29■■□□□ 1.48
COL20A1Q9P218 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
COL20A1Q9P218 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.29■■□□□ 1.48
COL20A1Q9P218 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL20A1Q9P218 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL20A1Q9P218 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL20A1Q9P218 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.28■■□□□ 1.48
COL20A1Q9P218 MIR663A-201ENST00000385250 93 ntBASIC24.28■■□□□ 1.48
COL20A1Q9P218 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
COL20A1Q9P218 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC24.28■■□□□ 1.48
COL20A1Q9P218 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.28■■□□□ 1.48
COL20A1Q9P218 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.28■■□□□ 1.48
COL20A1Q9P218 AL050303.2-201ENST00000619798 666 ntBASIC24.28■■□□□ 1.48
COL20A1Q9P218 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL20A1Q9P218 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.27■■□□□ 1.48
COL20A1Q9P218 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.27■■□□□ 1.48
COL20A1Q9P218 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
COL20A1Q9P218 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.27■■□□□ 1.48
COL20A1Q9P218 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
COL20A1Q9P218 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL20A1Q9P218 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.27■■□□□ 1.48
COL20A1Q9P218 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.27■■□□□ 1.48
COL20A1Q9P218 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
COL20A1Q9P218 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC24.27■■□□□ 1.48
COL20A1Q9P218 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.27■■□□□ 1.48
COL20A1Q9P218 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.27■■□□□ 1.48
COL20A1Q9P218 AC026471.6-201ENST00000622954 1905 ntBASIC24.27■■□□□ 1.48
COL20A1Q9P218 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL20A1Q9P218 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
COL20A1Q9P218 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL20A1Q9P218 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.27■■□□□ 1.48
COL20A1Q9P218 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.26■■□□□ 1.47
COL20A1Q9P218 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
COL20A1Q9P218 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
COL20A1Q9P218 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
COL20A1Q9P218 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
COL20A1Q9P218 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC24.26■■□□□ 1.47
COL20A1Q9P218 UQCRFS1P1-201ENST00000435169 820 ntBASIC24.26■■□□□ 1.47
COL20A1Q9P218 SLC7A5P2-201ENST00000553010 536 ntBASIC24.26■■□□□ 1.47
COL20A1Q9P218 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.26■■□□□ 1.47
COL20A1Q9P218 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
COL20A1Q9P218 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.26■■□□□ 1.47
COL20A1Q9P218 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
COL20A1Q9P218 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.26■■□□□ 1.47
COL20A1Q9P218 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.26■■□□□ 1.47
COL20A1Q9P218 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
COL20A1Q9P218 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
COL20A1Q9P218 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
COL20A1Q9P218 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
COL20A1Q9P218 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL20A1Q9P218 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL20A1Q9P218 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL20A1Q9P218 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
COL20A1Q9P218 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.25■■□□□ 1.47
COL20A1Q9P218 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.25■■□□□ 1.47
COL20A1Q9P218 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC24.25■■□□□ 1.47
COL20A1Q9P218 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.25■■□□□ 1.47
COL20A1Q9P218 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL20A1Q9P218 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
COL20A1Q9P218 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC24.25■■□□□ 1.47
COL20A1Q9P218 AC092053.2-201ENST00000640557 1818 ntBASIC24.25■■□□□ 1.47
COL20A1Q9P218 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL20A1Q9P218 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL20A1Q9P218 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.25■■□□□ 1.47
COL20A1Q9P218 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL20A1Q9P218 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
COL20A1Q9P218 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL20A1Q9P218 AC003102.1-202ENST00000563394 1796 ntBASIC24.24■■□□□ 1.47
COL20A1Q9P218 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL20A1Q9P218 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL20A1Q9P218 CNN2P6-201ENST00000439038 900 ntBASIC24.24■■□□□ 1.47
COL20A1Q9P218 AC006970.2-201ENST00000450065 779 ntBASIC24.24■■□□□ 1.47
COL20A1Q9P218 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL20A1Q9P218 AC104771.1-201ENST00000603335 964 ntBASIC24.24■■□□□ 1.47
COL20A1Q9P218 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.24■■□□□ 1.47
COL20A1Q9P218 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
COL20A1Q9P218 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL20A1Q9P218 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL20A1Q9P218 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL20A1Q9P218 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL20A1Q9P218 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL20A1Q9P218 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
COL20A1Q9P218 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
COL20A1Q9P218 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms