Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.08■□□□□ 0.49
COMMD9Q9P000 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COMMD9Q9P000 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
COMMD9Q9P000 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.08■□□□□ 0.48
COMMD9Q9P000 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COMMD9Q9P000 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COMMD9Q9P000 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COMMD9Q9P000 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.08■□□□□ 0.48
COMMD9Q9P000 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.08■□□□□ 0.48
COMMD9Q9P000 SNX5-217ENST00000606557 1087 ntBASIC18.08■□□□□ 0.48
COMMD9Q9P000 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
COMMD9Q9P000 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.08■□□□□ 0.48
COMMD9Q9P000 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.08■□□□□ 0.48
COMMD9Q9P000 AC007952.6-201ENST00000573168 2673 ntBASIC18.08■□□□□ 0.48
COMMD9Q9P000 AC003957.1-201ENST00000625108 2673 ntBASIC18.08■□□□□ 0.48
COMMD9Q9P000 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COMMD9Q9P000 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
COMMD9Q9P000 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COMMD9Q9P000 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD9Q9P000 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD9Q9P000 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
COMMD9Q9P000 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD9Q9P000 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD9Q9P000 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD9Q9P000 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.07■□□□□ 0.48
COMMD9Q9P000 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
COMMD9Q9P000 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
COMMD9Q9P000 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD9Q9P000 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD9Q9P000 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD9Q9P000 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.07■□□□□ 0.48
COMMD9Q9P000 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD9Q9P000 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
COMMD9Q9P000 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD9Q9P000 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD9Q9P000 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD9Q9P000 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD9Q9P000 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.06■□□□□ 0.48
COMMD9Q9P000 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD9Q9P000 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
COMMD9Q9P000 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD9Q9P000 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
COMMD9Q9P000 AC090340.1-201ENST00000620778 4980 ntBASIC18.06■□□□□ 0.48
COMMD9Q9P000 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD9Q9P000 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
COMMD9Q9P000 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD9Q9P000 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.06■□□□□ 0.48
COMMD9Q9P000 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
COMMD9Q9P000 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD9Q9P000 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD9Q9P000 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.06■□□□□ 0.48
COMMD9Q9P000 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD9Q9P000 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD9Q9P000 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD9Q9P000 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD9Q9P000 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD9Q9P000 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD9Q9P000 AC012354.3-201ENST00000623734 483 ntBASIC18.05■□□□□ 0.48
COMMD9Q9P000 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD9Q9P000 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD9Q9P000 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.05■□□□□ 0.48
COMMD9Q9P000 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
COMMD9Q9P000 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD9Q9P000 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
COMMD9Q9P000 AC144652.1-201ENST00000609974 1624 ntBASIC18.05■□□□□ 0.48
COMMD9Q9P000 Z98882.1-201ENST00000622160 2253 ntBASIC18.05■□□□□ 0.48
COMMD9Q9P000 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.05■□□□□ 0.48
COMMD9Q9P000 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD9Q9P000 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD9Q9P000 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD9Q9P000 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD9Q9P000 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.04■□□□□ 0.48
COMMD9Q9P000 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
COMMD9Q9P000 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD9Q9P000 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.04■□□□□ 0.48
COMMD9Q9P000 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD9Q9P000 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COMMD9Q9P000 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.04■□□□□ 0.48
COMMD9Q9P000 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.04■□□□□ 0.48
COMMD9Q9P000 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.04■□□□□ 0.48
COMMD9Q9P000 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COMMD9Q9P000 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD9Q9P000 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD9Q9P000 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD9Q9P000 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD9Q9P000 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD9Q9P000 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD9Q9P000 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD9Q9P000 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD9Q9P000 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD9Q9P000 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
COMMD9Q9P000 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.03■□□□□ 0.48
COMMD9Q9P000 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD9Q9P000 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD9Q9P000 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD9Q9P000 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
COMMD9Q9P000 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
COMMD9Q9P000 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
COMMD9Q9P000 YBX1P4-201ENST00000392794 808 ntBASIC18.03■□□□□ 0.48
COMMD9Q9P000 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms