Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
NLGN3Q9NZ94 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NLGN3Q9NZ94 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NLGN3Q9NZ94 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.89■□□□□ 0.93
NLGN3Q9NZ94 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NLGN3Q9NZ94 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.89■□□□□ 0.93
NLGN3Q9NZ94 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
NLGN3Q9NZ94 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.89■□□□□ 0.93
NLGN3Q9NZ94 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.89■□□□□ 0.93
NLGN3Q9NZ94 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NLGN3Q9NZ94 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NLGN3Q9NZ94 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NLGN3Q9NZ94 SLC29A4P1-201ENST00000398760 971 ntBASIC20.88■□□□□ 0.93
NLGN3Q9NZ94 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.88■□□□□ 0.93
NLGN3Q9NZ94 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.88■□□□□ 0.93
NLGN3Q9NZ94 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NLGN3Q9NZ94 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.88■□□□□ 0.93
NLGN3Q9NZ94 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.88■□□□□ 0.93
NLGN3Q9NZ94 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
NLGN3Q9NZ94 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NLGN3Q9NZ94 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NLGN3Q9NZ94 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.87■□□□□ 0.93
NLGN3Q9NZ94 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NLGN3Q9NZ94 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
NLGN3Q9NZ94 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NLGN3Q9NZ94 GUSBP6-202ENST00000438529 1198 ntBASIC20.87■□□□□ 0.93
NLGN3Q9NZ94 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.87■□□□□ 0.93
NLGN3Q9NZ94 CD99P1-205ENST00000527459 561 ntBASIC20.87■□□□□ 0.93
NLGN3Q9NZ94 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.87■□□□□ 0.93
NLGN3Q9NZ94 AC010536.3-201ENST00000620306 533 ntBASIC20.87■□□□□ 0.93
NLGN3Q9NZ94 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
NLGN3Q9NZ94 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NLGN3Q9NZ94 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.87■□□□□ 0.93
NLGN3Q9NZ94 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
NLGN3Q9NZ94 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NLGN3Q9NZ94 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NLGN3Q9NZ94 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NLGN3Q9NZ94 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NLGN3Q9NZ94 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NLGN3Q9NZ94 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NLGN3Q9NZ94 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NLGN3Q9NZ94 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.86■□□□□ 0.93
NLGN3Q9NZ94 CNN2P6-201ENST00000439038 900 ntBASIC20.86■□□□□ 0.93
NLGN3Q9NZ94 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.86■□□□□ 0.93
NLGN3Q9NZ94 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
NLGN3Q9NZ94 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NLGN3Q9NZ94 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NLGN3Q9NZ94 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NLGN3Q9NZ94 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NLGN3Q9NZ94 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NLGN3Q9NZ94 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NLGN3Q9NZ94 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.85■□□□□ 0.93
NLGN3Q9NZ94 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NLGN3Q9NZ94 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NLGN3Q9NZ94 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.85■□□□□ 0.93
NLGN3Q9NZ94 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NLGN3Q9NZ94 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.85■□□□□ 0.93
NLGN3Q9NZ94 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NLGN3Q9NZ94 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.85■□□□□ 0.93
NLGN3Q9NZ94 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
NLGN3Q9NZ94 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.85■□□□□ 0.93
NLGN3Q9NZ94 LINC00526-201ENST00000581067 1875 ntBASIC20.85■□□□□ 0.93
NLGN3Q9NZ94 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NLGN3Q9NZ94 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.85■□□□□ 0.93
NLGN3Q9NZ94 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NLGN3Q9NZ94 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NLGN3Q9NZ94 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NLGN3Q9NZ94 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NLGN3Q9NZ94 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NLGN3Q9NZ94 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NLGN3Q9NZ94 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NLGN3Q9NZ94 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
NLGN3Q9NZ94 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
NLGN3Q9NZ94 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.84■□□□□ 0.93
NLGN3Q9NZ94 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.84■□□□□ 0.93
NLGN3Q9NZ94 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NLGN3Q9NZ94 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.84■□□□□ 0.93
NLGN3Q9NZ94 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.84■□□□□ 0.93
NLGN3Q9NZ94 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.84■□□□□ 0.93
NLGN3Q9NZ94 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NLGN3Q9NZ94 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NLGN3Q9NZ94 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.84■□□□□ 0.93
NLGN3Q9NZ94 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NLGN3Q9NZ94 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.84■□□□□ 0.93
NLGN3Q9NZ94 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.83■□□□□ 0.93
NLGN3Q9NZ94 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.83■□□□□ 0.93
NLGN3Q9NZ94 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NLGN3Q9NZ94 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
NLGN3Q9NZ94 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.83■□□□□ 0.93
NLGN3Q9NZ94 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NLGN3Q9NZ94 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
NLGN3Q9NZ94 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NLGN3Q9NZ94 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.83■□□□□ 0.93
NLGN3Q9NZ94 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.83■□□□□ 0.93
NLGN3Q9NZ94 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
NLGN3Q9NZ94 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.83■□□□□ 0.93
NLGN3Q9NZ94 AF201337.1-201ENST00000520239 748 ntBASIC20.83■□□□□ 0.93
NLGN3Q9NZ94 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
NLGN3Q9NZ94 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
NLGN3Q9NZ94 EEF1DP3-203ENST00000566025 782 ntBASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms