Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
UBQLN4Q9NRR5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN4Q9NRR5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN4Q9NRR5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN4Q9NRR5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
UBQLN4Q9NRR5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
UBQLN4Q9NRR5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN4Q9NRR5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.63■□□□□ 0.73
UBQLN4Q9NRR5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN4Q9NRR5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
UBQLN4Q9NRR5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.63■□□□□ 0.73
UBQLN4Q9NRR5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN4Q9NRR5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN4Q9NRR5 PKD1P6-201ENST00000343738 4769 ntBASIC19.63■□□□□ 0.73
UBQLN4Q9NRR5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN4Q9NRR5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN4Q9NRR5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.62■□□□□ 0.73
UBQLN4Q9NRR5 AC005224.4-201ENST00000583262 1652 ntBASIC19.62■□□□□ 0.73
UBQLN4Q9NRR5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
UBQLN4Q9NRR5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN4Q9NRR5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN4Q9NRR5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.62■□□□□ 0.73
UBQLN4Q9NRR5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN4Q9NRR5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
UBQLN4Q9NRR5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN4Q9NRR5 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.62■□□□□ 0.73
UBQLN4Q9NRR5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.62■□□□□ 0.73
UBQLN4Q9NRR5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.62■□□□□ 0.73
UBQLN4Q9NRR5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.62■□□□□ 0.73
UBQLN4Q9NRR5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.62■□□□□ 0.73
UBQLN4Q9NRR5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
UBQLN4Q9NRR5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.62■□□□□ 0.73
UBQLN4Q9NRR5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN4Q9NRR5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN4Q9NRR5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN4Q9NRR5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.61■□□□□ 0.73
UBQLN4Q9NRR5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN4Q9NRR5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
UBQLN4Q9NRR5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.61■□□□□ 0.73
UBQLN4Q9NRR5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN4Q9NRR5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
UBQLN4Q9NRR5 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.61■□□□□ 0.73
UBQLN4Q9NRR5 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN4Q9NRR5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.61■□□□□ 0.73
UBQLN4Q9NRR5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.61■□□□□ 0.73
UBQLN4Q9NRR5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN4Q9NRR5 AC003102.1-202ENST00000563394 1796 ntBASIC19.61■□□□□ 0.73
UBQLN4Q9NRR5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.61■□□□□ 0.73
UBQLN4Q9NRR5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.61■□□□□ 0.73
UBQLN4Q9NRR5 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN4Q9NRR5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.61■□□□□ 0.73
UBQLN4Q9NRR5 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN4Q9NRR5 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.6■□□□□ 0.73
UBQLN4Q9NRR5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN4Q9NRR5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN4Q9NRR5 AC055733.4-201ENST00000638462 1354 ntBASIC19.6■□□□□ 0.73
UBQLN4Q9NRR5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN4Q9NRR5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.6■□□□□ 0.73
UBQLN4Q9NRR5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN4Q9NRR5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN4Q9NRR5 MIR6084-201ENST00000622012 110 ntBASIC19.6■□□□□ 0.73
UBQLN4Q9NRR5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
UBQLN4Q9NRR5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
UBQLN4Q9NRR5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN4Q9NRR5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
UBQLN4Q9NRR5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN4Q9NRR5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN4Q9NRR5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.59■□□□□ 0.73
UBQLN4Q9NRR5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.59■□□□□ 0.73
UBQLN4Q9NRR5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN4Q9NRR5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.59■□□□□ 0.73
UBQLN4Q9NRR5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN4Q9NRR5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN4Q9NRR5 AC244015.2-201ENST00000616358 1861 ntBASIC19.59■□□□□ 0.73
UBQLN4Q9NRR5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
UBQLN4Q9NRR5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN4Q9NRR5 AC027612.3-201ENST00000413684 1047 ntBASIC19.59■□□□□ 0.73
UBQLN4Q9NRR5 ZNRF2P3-201ENST00000424200 374 ntBASIC19.59■□□□□ 0.73
UBQLN4Q9NRR5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN4Q9NRR5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.59■□□□□ 0.73
UBQLN4Q9NRR5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN4Q9NRR5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN4Q9NRR5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.58■□□□□ 0.73
UBQLN4Q9NRR5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBQLN4Q9NRR5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBQLN4Q9NRR5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBQLN4Q9NRR5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBQLN4Q9NRR5 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.58■□□□□ 0.72
UBQLN4Q9NRR5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBQLN4Q9NRR5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
UBQLN4Q9NRR5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.58■□□□□ 0.72
UBQLN4Q9NRR5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.58■□□□□ 0.72
UBQLN4Q9NRR5 TPRG1LP1-201ENST00000598702 760 ntBASIC19.58■□□□□ 0.72
UBQLN4Q9NRR5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBQLN4Q9NRR5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
UBQLN4Q9NRR5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN4Q9NRR5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.57■□□□□ 0.72
UBQLN4Q9NRR5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.57■□□□□ 0.72
UBQLN4Q9NRR5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN4Q9NRR5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms