Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF304Q9HCX3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF304Q9HCX3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.23■□□□□ 0.83
ZNF304Q9HCX3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF304Q9HCX3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF304Q9HCX3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF304Q9HCX3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF304Q9HCX3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF304Q9HCX3 AC016769.1-201ENST00000409132 1010 ntBASIC20.23■□□□□ 0.83
ZNF304Q9HCX3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.23■□□□□ 0.83
ZNF304Q9HCX3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
ZNF304Q9HCX3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.23■□□□□ 0.83
ZNF304Q9HCX3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ZNF304Q9HCX3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF304Q9HCX3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF304Q9HCX3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF304Q9HCX3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ZNF304Q9HCX3 AP006587.3-201ENST00000525742 1516 ntBASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 AC004911.1-201ENST00000416316 871 ntBASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ZNF304Q9HCX3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF304Q9HCX3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ZNF304Q9HCX3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF304Q9HCX3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF304Q9HCX3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF304Q9HCX3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF304Q9HCX3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF304Q9HCX3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNF304Q9HCX3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF304Q9HCX3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ZNF304Q9HCX3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF304Q9HCX3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF304Q9HCX3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF304Q9HCX3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF304Q9HCX3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF304Q9HCX3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF304Q9HCX3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF304Q9HCX3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF304Q9HCX3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ZNF304Q9HCX3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF304Q9HCX3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF304Q9HCX3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF304Q9HCX3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF304Q9HCX3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF304Q9HCX3 AC104187.1-201ENST00000607510 612 ntBASIC20.2■□□□□ 0.82
ZNF304Q9HCX3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF304Q9HCX3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF304Q9HCX3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF304Q9HCX3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF304Q9HCX3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF304Q9HCX3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF304Q9HCX3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.19■□□□□ 0.82
ZNF304Q9HCX3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
ZNF304Q9HCX3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF304Q9HCX3 AC080038.3-201ENST00000623346 1952 ntBASIC20.19■□□□□ 0.82
ZNF304Q9HCX3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF304Q9HCX3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF304Q9HCX3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF304Q9HCX3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF304Q9HCX3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF304Q9HCX3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF304Q9HCX3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
ZNF304Q9HCX3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF304Q9HCX3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ZNF304Q9HCX3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF304Q9HCX3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF304Q9HCX3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF304Q9HCX3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF304Q9HCX3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF304Q9HCX3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF304Q9HCX3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF304Q9HCX3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF304Q9HCX3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF304Q9HCX3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF304Q9HCX3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF304Q9HCX3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF304Q9HCX3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF304Q9HCX3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF304Q9HCX3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF304Q9HCX3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF304Q9HCX3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms