Protein–RNA interactions for Protein: Q9H6Z4

RANBP3, Ran-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3Q9H6Z4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RANBP3Q9H6Z4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
RANBP3Q9H6Z4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RANBP3Q9H6Z4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RANBP3Q9H6Z4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RANBP3Q9H6Z4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RANBP3Q9H6Z4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RANBP3Q9H6Z4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RANBP3Q9H6Z4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.45■□□□□ 0.54
RANBP3Q9H6Z4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.45■□□□□ 0.54
RANBP3Q9H6Z4 MIR6722-201ENST00000617286 78 ntBASIC18.45■□□□□ 0.54
RANBP3Q9H6Z4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RANBP3Q9H6Z4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RANBP3Q9H6Z4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RANBP3Q9H6Z4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.45■□□□□ 0.54
RANBP3Q9H6Z4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.45■□□□□ 0.54
RANBP3Q9H6Z4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RANBP3Q9H6Z4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RANBP3Q9H6Z4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RANBP3Q9H6Z4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RANBP3Q9H6Z4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RANBP3Q9H6Z4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RANBP3Q9H6Z4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RANBP3Q9H6Z4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.44■□□□□ 0.54
RANBP3Q9H6Z4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.44■□□□□ 0.54
RANBP3Q9H6Z4 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.44■□□□□ 0.54
RANBP3Q9H6Z4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RANBP3Q9H6Z4 SNX5-217ENST00000606557 1087 ntBASIC18.44■□□□□ 0.54
RANBP3Q9H6Z4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RANBP3Q9H6Z4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.44■□□□□ 0.54
RANBP3Q9H6Z4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RANBP3Q9H6Z4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RANBP3Q9H6Z4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RANBP3Q9H6Z4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RANBP3Q9H6Z4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 AC131281.2-201ENST00000520478 145 ntBASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 AC019069.1-201ENST00000610008 1333 ntBASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RANBP3Q9H6Z4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RANBP3Q9H6Z4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RANBP3Q9H6Z4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RANBP3Q9H6Z4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RANBP3Q9H6Z4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RANBP3Q9H6Z4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RANBP3Q9H6Z4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RANBP3Q9H6Z4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.42■□□□□ 0.54
RANBP3Q9H6Z4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RANBP3Q9H6Z4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.42■□□□□ 0.54
RANBP3Q9H6Z4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.42■□□□□ 0.54
RANBP3Q9H6Z4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
RANBP3Q9H6Z4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.42■□□□□ 0.54
RANBP3Q9H6Z4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
RANBP3Q9H6Z4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RANBP3Q9H6Z4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RANBP3Q9H6Z4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RANBP3Q9H6Z4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RANBP3Q9H6Z4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RANBP3Q9H6Z4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RANBP3Q9H6Z4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RANBP3Q9H6Z4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RANBP3Q9H6Z4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RANBP3Q9H6Z4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RANBP3Q9H6Z4 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.41■□□□□ 0.54
RANBP3Q9H6Z4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.41■□□□□ 0.54
RANBP3Q9H6Z4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.41■□□□□ 0.54
RANBP3Q9H6Z4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.41■□□□□ 0.54
RANBP3Q9H6Z4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RANBP3Q9H6Z4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RANBP3Q9H6Z4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.41■□□□□ 0.54
RANBP3Q9H6Z4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.41■□□□□ 0.54
RANBP3Q9H6Z4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RANBP3Q9H6Z4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RANBP3Q9H6Z4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RANBP3Q9H6Z4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RANBP3Q9H6Z4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
RANBP3Q9H6Z4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RANBP3Q9H6Z4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RANBP3Q9H6Z4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RANBP3Q9H6Z4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RANBP3Q9H6Z4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RANBP3Q9H6Z4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RANBP3Q9H6Z4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RANBP3Q9H6Z4 AL022069.1-201ENST00000568025 1636 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms