Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.6
SLIRPQ9GZT3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLIRPQ9GZT3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLIRPQ9GZT3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLIRPQ9GZT3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 AC009086.3-201ENST00000623486 1008 ntBASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 BX323043.1-201ENST00000641006 1765 ntBASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLIRPQ9GZT3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 FP325331.1-202ENST00000623531 1380 ntBASIC18.81■□□□□ 0.6
SLIRPQ9GZT3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLIRPQ9GZT3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLIRPQ9GZT3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SLIRPQ9GZT3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLIRPQ9GZT3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLIRPQ9GZT3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLIRPQ9GZT3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLIRPQ9GZT3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLIRPQ9GZT3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLIRPQ9GZT3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLIRPQ9GZT3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLIRPQ9GZT3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLIRPQ9GZT3 AC009831.1-201ENST00000580420 1582 ntBASIC18.8■□□□□ 0.6
SLIRPQ9GZT3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLIRPQ9GZT3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
SLIRPQ9GZT3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLIRPQ9GZT3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 AC098818.2-201ENST00000564925 2320 ntBASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SLIRPQ9GZT3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.78■□□□□ 0.6
SLIRPQ9GZT3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLIRPQ9GZT3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLIRPQ9GZT3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLIRPQ9GZT3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.78■□□□□ 0.6
SLIRPQ9GZT3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLIRPQ9GZT3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms