Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
UBE2OQ9C0C9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.6■■□□□ 1.37
UBE2OQ9C0C9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.6■■□□□ 1.37
UBE2OQ9C0C9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
UBE2OQ9C0C9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
UBE2OQ9C0C9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
UBE2OQ9C0C9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
UBE2OQ9C0C9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
UBE2OQ9C0C9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
UBE2OQ9C0C9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
UBE2OQ9C0C9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.59■■□□□ 1.37
UBE2OQ9C0C9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
UBE2OQ9C0C9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
UBE2OQ9C0C9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
UBE2OQ9C0C9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.59■■□□□ 1.37
UBE2OQ9C0C9 MIR4497-201ENST00000583208 89 ntBASIC23.59■■□□□ 1.37
UBE2OQ9C0C9 REXO1L12P-201ENST00000622156 912 ntBASIC23.59■■□□□ 1.37
UBE2OQ9C0C9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
UBE2OQ9C0C9 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
UBE2OQ9C0C9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
UBE2OQ9C0C9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
UBE2OQ9C0C9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.58■■□□□ 1.37
UBE2OQ9C0C9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.58■■□□□ 1.37
UBE2OQ9C0C9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
UBE2OQ9C0C9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
UBE2OQ9C0C9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
UBE2OQ9C0C9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.58■■□□□ 1.37
UBE2OQ9C0C9 AC091874.3-201ENST00000512672 1195 ntBASIC23.58■■□□□ 1.37
UBE2OQ9C0C9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
UBE2OQ9C0C9 AC138907.5-202ENST00000569484 235 ntBASIC23.58■■□□□ 1.37
UBE2OQ9C0C9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.58■■□□□ 1.37
UBE2OQ9C0C9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.58■■□□□ 1.37
UBE2OQ9C0C9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.58■■□□□ 1.37
UBE2OQ9C0C9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
UBE2OQ9C0C9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
UBE2OQ9C0C9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
UBE2OQ9C0C9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.58■■□□□ 1.36
UBE2OQ9C0C9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
UBE2OQ9C0C9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.58■■□□□ 1.36
UBE2OQ9C0C9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
UBE2OQ9C0C9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
UBE2OQ9C0C9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
UBE2OQ9C0C9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
UBE2OQ9C0C9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
UBE2OQ9C0C9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
UBE2OQ9C0C9 AC007322.4-201ENST00000509611 723 ntBASIC23.57■■□□□ 1.36
UBE2OQ9C0C9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.57■■□□□ 1.36
UBE2OQ9C0C9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.57■■□□□ 1.36
UBE2OQ9C0C9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
UBE2OQ9C0C9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.57■■□□□ 1.36
UBE2OQ9C0C9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.57■■□□□ 1.36
UBE2OQ9C0C9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
UBE2OQ9C0C9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
UBE2OQ9C0C9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.56■■□□□ 1.36
UBE2OQ9C0C9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.56■■□□□ 1.36
UBE2OQ9C0C9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
UBE2OQ9C0C9 KRT18P21-201ENST00000515767 1272 ntBASIC23.56■■□□□ 1.36
UBE2OQ9C0C9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.56■■□□□ 1.36
UBE2OQ9C0C9 AL359736.2-201ENST00000621992 437 ntBASIC23.56■■□□□ 1.36
UBE2OQ9C0C9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.56■■□□□ 1.36
UBE2OQ9C0C9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
UBE2OQ9C0C9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
UBE2OQ9C0C9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.55■■□□□ 1.36
UBE2OQ9C0C9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
UBE2OQ9C0C9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
UBE2OQ9C0C9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
UBE2OQ9C0C9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
UBE2OQ9C0C9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
UBE2OQ9C0C9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.55■■□□□ 1.36
UBE2OQ9C0C9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.55■■□□□ 1.36
UBE2OQ9C0C9 UNC93B5-201ENST00000530315 699 ntBASIC23.55■■□□□ 1.36
UBE2OQ9C0C9 AP003097.1-201ENST00000530657 1135 ntBASIC23.55■■□□□ 1.36
UBE2OQ9C0C9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.55■■□□□ 1.36
UBE2OQ9C0C9 LINC01023-201ENST00000606054 436 ntBASIC23.55■■□□□ 1.36
UBE2OQ9C0C9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
UBE2OQ9C0C9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
UBE2OQ9C0C9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.55■■□□□ 1.36
UBE2OQ9C0C9 AC004812.2-201ENST00000611079 2094 ntBASIC23.55■■□□□ 1.36
UBE2OQ9C0C9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
UBE2OQ9C0C9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
UBE2OQ9C0C9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
UBE2OQ9C0C9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
UBE2OQ9C0C9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
UBE2OQ9C0C9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.54■■□□□ 1.36
UBE2OQ9C0C9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.54■■□□□ 1.36
UBE2OQ9C0C9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.54■■□□□ 1.36
UBE2OQ9C0C9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
UBE2OQ9C0C9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.54■■□□□ 1.36
UBE2OQ9C0C9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.54■■□□□ 1.36
UBE2OQ9C0C9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
UBE2OQ9C0C9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.54■■□□□ 1.36
UBE2OQ9C0C9 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
UBE2OQ9C0C9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.53■■□□□ 1.36
UBE2OQ9C0C9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
UBE2OQ9C0C9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
UBE2OQ9C0C9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
UBE2OQ9C0C9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
UBE2OQ9C0C9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
UBE2OQ9C0C9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
UBE2OQ9C0C9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms