Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
SSBP3Q9BWW4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 AC137761.2-201ENST00000561729 223 ntBASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 AC145350.3-201ENST00000569033 163 ntBASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSBP3Q9BWW4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 KRT18P61-201ENST00000585825 1298 ntBASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSBP3Q9BWW4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSBP3Q9BWW4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.74■□□□□ 0.43
SSBP3Q9BWW4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SSBP3Q9BWW4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.74■□□□□ 0.43
SSBP3Q9BWW4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSBP3Q9BWW4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SSBP3Q9BWW4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSBP3Q9BWW4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.74■□□□□ 0.43
SSBP3Q9BWW4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSBP3Q9BWW4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SSBP3Q9BWW4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SSBP3Q9BWW4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.74■□□□□ 0.43
SSBP3Q9BWW4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.74■□□□□ 0.43
SSBP3Q9BWW4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SSBP3Q9BWW4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.74■□□□□ 0.43
SSBP3Q9BWW4 AC092437.1-201ENST00000624794 1048 ntBASIC17.74■□□□□ 0.43
SSBP3Q9BWW4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.74■□□□□ 0.43
SSBP3Q9BWW4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSBP3Q9BWW4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SSBP3Q9BWW4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.74■□□□□ 0.43
SSBP3Q9BWW4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 AP006587.3-201ENST00000525742 1516 ntBASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 AC004911.1-201ENST00000416316 871 ntBASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 AC127496.7-201ENST00000625110 1798 ntBASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSBP3Q9BWW4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSBP3Q9BWW4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSBP3Q9BWW4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSBP3Q9BWW4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
SSBP3Q9BWW4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SSBP3Q9BWW4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSBP3Q9BWW4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.72■□□□□ 0.43
SSBP3Q9BWW4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.72■□□□□ 0.43
SSBP3Q9BWW4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SSBP3Q9BWW4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSBP3Q9BWW4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSBP3Q9BWW4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSBP3Q9BWW4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms