Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.33■□□□□ 0.84
THUMPD3Q9BV44 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
THUMPD3Q9BV44 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
THUMPD3Q9BV44 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
THUMPD3Q9BV44 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
THUMPD3Q9BV44 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
THUMPD3Q9BV44 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.32■□□□□ 0.84
THUMPD3Q9BV44 AC026471.6-201ENST00000622954 1905 ntBASIC20.32■□□□□ 0.84
THUMPD3Q9BV44 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.32■□□□□ 0.84
THUMPD3Q9BV44 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
THUMPD3Q9BV44 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
THUMPD3Q9BV44 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.32■□□□□ 0.84
THUMPD3Q9BV44 AL031602.1-201ENST00000633169 911 ntBASIC20.32■□□□□ 0.84
THUMPD3Q9BV44 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.32■□□□□ 0.84
THUMPD3Q9BV44 SLC25A24-204ENST00000569674 2357 ntBASIC20.32■□□□□ 0.84
THUMPD3Q9BV44 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.32■□□□□ 0.84
THUMPD3Q9BV44 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
THUMPD3Q9BV44 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
THUMPD3Q9BV44 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
THUMPD3Q9BV44 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
THUMPD3Q9BV44 OR7E47P-201ENST00000546390 1422 ntBASIC20.31■□□□□ 0.84
THUMPD3Q9BV44 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
THUMPD3Q9BV44 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.31■□□□□ 0.84
THUMPD3Q9BV44 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.31■□□□□ 0.84
THUMPD3Q9BV44 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.31■□□□□ 0.84
THUMPD3Q9BV44 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.31■□□□□ 0.84
THUMPD3Q9BV44 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
THUMPD3Q9BV44 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.31■□□□□ 0.84
THUMPD3Q9BV44 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
THUMPD3Q9BV44 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.31■□□□□ 0.84
THUMPD3Q9BV44 AC133637.1-201ENST00000624115 1537 ntBASIC20.31■□□□□ 0.84
THUMPD3Q9BV44 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
THUMPD3Q9BV44 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
THUMPD3Q9BV44 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
THUMPD3Q9BV44 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.31■□□□□ 0.84
THUMPD3Q9BV44 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
THUMPD3Q9BV44 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.31■□□□□ 0.84
THUMPD3Q9BV44 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
THUMPD3Q9BV44 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
THUMPD3Q9BV44 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
THUMPD3Q9BV44 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
THUMPD3Q9BV44 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
THUMPD3Q9BV44 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
THUMPD3Q9BV44 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.29■□□□□ 0.84
THUMPD3Q9BV44 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.29■□□□□ 0.84
THUMPD3Q9BV44 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
THUMPD3Q9BV44 AC104564.3-201ENST00000582367 638 ntBASIC20.29■□□□□ 0.84
THUMPD3Q9BV44 AL512631.2-201ENST00000604634 923 ntBASIC20.29■□□□□ 0.84
THUMPD3Q9BV44 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.29■□□□□ 0.84
THUMPD3Q9BV44 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
THUMPD3Q9BV44 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
THUMPD3Q9BV44 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
THUMPD3Q9BV44 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.29■□□□□ 0.84
THUMPD3Q9BV44 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
THUMPD3Q9BV44 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
THUMPD3Q9BV44 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.28■□□□□ 0.84
THUMPD3Q9BV44 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.28■□□□□ 0.84
THUMPD3Q9BV44 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.28■□□□□ 0.84
THUMPD3Q9BV44 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
THUMPD3Q9BV44 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
THUMPD3Q9BV44 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
THUMPD3Q9BV44 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
THUMPD3Q9BV44 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.28■□□□□ 0.84
THUMPD3Q9BV44 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.28■□□□□ 0.84
THUMPD3Q9BV44 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
THUMPD3Q9BV44 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.28■□□□□ 0.84
THUMPD3Q9BV44 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
THUMPD3Q9BV44 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.28■□□□□ 0.84
THUMPD3Q9BV44 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
THUMPD3Q9BV44 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.28■□□□□ 0.84
THUMPD3Q9BV44 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.28■□□□□ 0.84
THUMPD3Q9BV44 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms