Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.06■□□□□ 0.8
PKP2Q99959 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.06■□□□□ 0.8
PKP2Q99959 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PKP2Q99959 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.05■□□□□ 0.8
PKP2Q99959 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PKP2Q99959 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.05■□□□□ 0.8
PKP2Q99959 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PKP2Q99959 KRT18P24-201ENST00000344739 1156 ntBASIC20.05■□□□□ 0.8
PKP2Q99959 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.05■□□□□ 0.8
PKP2Q99959 SNX5-217ENST00000606557 1087 ntBASIC20.05■□□□□ 0.8
PKP2Q99959 AC012354.3-201ENST00000623734 483 ntBASIC20.05■□□□□ 0.8
PKP2Q99959 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.05■□□□□ 0.8
PKP2Q99959 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PKP2Q99959 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.05■□□□□ 0.8
PKP2Q99959 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
PKP2Q99959 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PKP2Q99959 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PKP2Q99959 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PKP2Q99959 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.05■□□□□ 0.8
PKP2Q99959 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PKP2Q99959 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.04■□□□□ 0.8
PKP2Q99959 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PKP2Q99959 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.04■□□□□ 0.8
PKP2Q99959 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PKP2Q99959 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PKP2Q99959 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PKP2Q99959 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PKP2Q99959 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PKP2Q99959 AP005212.1-201ENST00000581547 1997 ntBASIC20.04■□□□□ 0.8
PKP2Q99959 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PKP2Q99959 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PKP2Q99959 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PKP2Q99959 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.03■□□□□ 0.8
PKP2Q99959 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.03■□□□□ 0.8
PKP2Q99959 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP2Q99959 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.03■□□□□ 0.8
PKP2Q99959 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP2Q99959 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP2Q99959 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.03■□□□□ 0.8
PKP2Q99959 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.03■□□□□ 0.8
PKP2Q99959 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.03■□□□□ 0.8
PKP2Q99959 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP2Q99959 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PKP2Q99959 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP2Q99959 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.02■□□□□ 0.8
PKP2Q99959 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP2Q99959 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.02■□□□□ 0.8
PKP2Q99959 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
PKP2Q99959 AC073314.1-201ENST00000568729 2216 ntBASIC20.02■□□□□ 0.8
PKP2Q99959 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP2Q99959 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.02■□□□□ 0.8
PKP2Q99959 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.02■□□□□ 0.8
PKP2Q99959 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP2Q99959 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP2Q99959 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.02■□□□□ 0.8
PKP2Q99959 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PKP2Q99959 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP2Q99959 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.02■□□□□ 0.8
PKP2Q99959 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.02■□□□□ 0.8
PKP2Q99959 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
PKP2Q99959 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PKP2Q99959 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
PKP2Q99959 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PKP2Q99959 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
PKP2Q99959 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP2Q99959 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.01■□□□□ 0.79
PKP2Q99959 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PKP2Q99959 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.01■□□□□ 0.79
PKP2Q99959 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP2Q99959 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP2Q99959 DUX4L18-201ENST00000553347 1267 ntBASIC20.01■□□□□ 0.79
PKP2Q99959 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PKP2Q99959 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PKP2Q99959 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.01■□□□□ 0.79
PKP2Q99959 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.01■□□□□ 0.79
PKP2Q99959 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP2Q99959 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PKP2Q99959 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.01■□□□□ 0.79
PKP2Q99959 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.01■□□□□ 0.79
PKP2Q99959 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
PKP2Q99959 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20■□□□□ 0.79
PKP2Q99959 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PKP2Q99959 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PKP2Q99959 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20■□□□□ 0.79
PKP2Q99959 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PKP2Q99959 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PKP2Q99959 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PKP2Q99959 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PKP2Q99959 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20■□□□□ 0.79
PKP2Q99959 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20■□□□□ 0.79
PKP2Q99959 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20■□□□□ 0.79
PKP2Q99959 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PKP2Q99959 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PKP2Q99959 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20■□□□□ 0.79
PKP2Q99959 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PKP2Q99959 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PKP2Q99959 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PKP2Q99959 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.99■□□□□ 0.79
PKP2Q99959 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PKP2Q99959 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms