Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LITAFQ99732 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LITAFQ99732 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LITAFQ99732 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.24□□□□□ -0.13
LITAFQ99732 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.24□□□□□ -0.13
LITAFQ99732 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LITAFQ99732 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.24□□□□□ -0.13
LITAFQ99732 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
LITAFQ99732 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.24□□□□□ -0.13
LITAFQ99732 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.24□□□□□ -0.13
LITAFQ99732 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LITAFQ99732 AC004687.1-201ENST00000579003 1625 ntBASIC14.24□□□□□ -0.13
LITAFQ99732 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LITAFQ99732 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LITAFQ99732 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC14.24□□□□□ -0.13
LITAFQ99732 DUX4L4-201ENST00000566884 1269 ntBASIC14.24□□□□□ -0.13
LITAFQ99732 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC14.24□□□□□ -0.13
LITAFQ99732 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC14.24□□□□□ -0.13
LITAFQ99732 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC14.24□□□□□ -0.13
LITAFQ99732 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.24□□□□□ -0.13
LITAFQ99732 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LITAFQ99732 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC14.24□□□□□ -0.13
LITAFQ99732 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LITAFQ99732 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LITAFQ99732 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.23□□□□□ -0.13
LITAFQ99732 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LITAFQ99732 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LITAFQ99732 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LITAFQ99732 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
LITAFQ99732 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LITAFQ99732 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LITAFQ99732 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LITAFQ99732 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LITAFQ99732 ASB1-202ENST00000409297 878 ntTSL 5 BASIC14.23□□□□□ -0.13
LITAFQ99732 MIR6765-201ENST00000614092 87 ntBASIC14.23□□□□□ -0.13
LITAFQ99732 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
LITAFQ99732 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LITAFQ99732 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LITAFQ99732 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LITAFQ99732 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC14.23□□□□□ -0.13
LITAFQ99732 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.23□□□□□ -0.13
LITAFQ99732 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
LITAFQ99732 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LITAFQ99732 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LITAFQ99732 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LITAFQ99732 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LITAFQ99732 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LITAFQ99732 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LITAFQ99732 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LITAFQ99732 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.22□□□□□ -0.13
LITAFQ99732 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LITAFQ99732 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LITAFQ99732 HES4-202ENST00000428771 1040 ntTSL 2 BASIC14.22□□□□□ -0.13
LITAFQ99732 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LITAFQ99732 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC14.22□□□□□ -0.13
LITAFQ99732 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
LITAFQ99732 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
LITAFQ99732 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
LITAFQ99732 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LITAFQ99732 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LITAFQ99732 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LITAFQ99732 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LITAFQ99732 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.22□□□□□ -0.13
LITAFQ99732 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LITAFQ99732 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC14.21□□□□□ -0.13
LITAFQ99732 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LITAFQ99732 AC006128.1-201ENST00000624704 1661 ntBASIC14.21□□□□□ -0.13
LITAFQ99732 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LITAFQ99732 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LITAFQ99732 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LITAFQ99732 SMG8-203ENST00000578922 2178 ntBASIC14.21□□□□□ -0.13
LITAFQ99732 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LITAFQ99732 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LITAFQ99732 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LITAFQ99732 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LITAFQ99732 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LITAFQ99732 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
LITAFQ99732 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
LITAFQ99732 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LITAFQ99732 REST-206ENST00000612429 1376 ntTSL 5 BASIC14.21□□□□□ -0.14
LITAFQ99732 REST-207ENST00000616975 1370 ntTSL 5 BASIC14.21□□□□□ -0.14
LITAFQ99732 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LITAFQ99732 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
LITAFQ99732 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LITAFQ99732 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LITAFQ99732 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LITAFQ99732 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LITAFQ99732 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LITAFQ99732 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
LITAFQ99732 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.2□□□□□ -0.14
LITAFQ99732 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.2□□□□□ -0.14
LITAFQ99732 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LITAFQ99732 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LITAFQ99732 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LITAFQ99732 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LITAFQ99732 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC14.2□□□□□ -0.14
LITAFQ99732 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LITAFQ99732 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LITAFQ99732 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.2□□□□□ -0.14
LITAFQ99732 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms