Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.32■□□□□ 0.52
CSMD1Q96PZ7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.32■□□□□ 0.52
CSMD1Q96PZ7 AC008403.3-201ENST00000598924 454 ntBASIC18.32■□□□□ 0.52
CSMD1Q96PZ7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSMD1Q96PZ7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSMD1Q96PZ7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSMD1Q96PZ7 RN7SL850P-201ENST00000579959 291 ntBASIC18.32■□□□□ 0.52
CSMD1Q96PZ7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CSMD1Q96PZ7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CSMD1Q96PZ7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSMD1Q96PZ7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.32■□□□□ 0.52
CSMD1Q96PZ7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.32■□□□□ 0.52
CSMD1Q96PZ7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.32■□□□□ 0.52
CSMD1Q96PZ7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 FP325331.1-202ENST00000623531 1380 ntBASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD1Q96PZ7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.3■□□□□ 0.52
CSMD1Q96PZ7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.3■□□□□ 0.52
CSMD1Q96PZ7 KRT18P35-201ENST00000510488 1269 ntBASIC18.3■□□□□ 0.52
CSMD1Q96PZ7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.3■□□□□ 0.52
CSMD1Q96PZ7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSMD1Q96PZ7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.3■□□□□ 0.52
CSMD1Q96PZ7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.3■□□□□ 0.52
CSMD1Q96PZ7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSMD1Q96PZ7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSMD1Q96PZ7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.3■□□□□ 0.52
CSMD1Q96PZ7 TERF1P5-201ENST00000477545 1207 ntBASIC18.3■□□□□ 0.52
CSMD1Q96PZ7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSMD1Q96PZ7 AP003097.1-201ENST00000530657 1135 ntBASIC18.3■□□□□ 0.52
CSMD1Q96PZ7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSMD1Q96PZ7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.3■□□□□ 0.52
CSMD1Q96PZ7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.3■□□□□ 0.52
CSMD1Q96PZ7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.3■□□□□ 0.52
CSMD1Q96PZ7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSMD1Q96PZ7 AL512625.2-201ENST00000417533 625 ntBASIC18.3■□□□□ 0.52
CSMD1Q96PZ7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSMD1Q96PZ7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CSMD1Q96PZ7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSMD1Q96PZ7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.29■□□□□ 0.52
CSMD1Q96PZ7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.29■□□□□ 0.52
CSMD1Q96PZ7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSMD1Q96PZ7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.29■□□□□ 0.52
CSMD1Q96PZ7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSMD1Q96PZ7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CSMD1Q96PZ7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSMD1Q96PZ7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSMD1Q96PZ7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CSMD1Q96PZ7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.29■□□□□ 0.52
CSMD1Q96PZ7 OR10C1-204ENST00000622521 1039 ntBASIC18.29■□□□□ 0.52
CSMD1Q96PZ7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.28■□□□□ 0.52
CSMD1Q96PZ7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSMD1Q96PZ7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSMD1Q96PZ7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSMD1Q96PZ7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSMD1Q96PZ7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSMD1Q96PZ7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.28■□□□□ 0.52
CSMD1Q96PZ7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.28■□□□□ 0.52
CSMD1Q96PZ7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSMD1Q96PZ7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSMD1Q96PZ7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSMD1Q96PZ7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.27■□□□□ 0.52
CSMD1Q96PZ7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.27■□□□□ 0.52
CSMD1Q96PZ7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.27■□□□□ 0.52
CSMD1Q96PZ7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.27■□□□□ 0.52
CSMD1Q96PZ7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CSMD1Q96PZ7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.27■□□□□ 0.52
CSMD1Q96PZ7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CSMD1Q96PZ7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSMD1Q96PZ7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
CSMD1Q96PZ7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.27■□□□□ 0.51
CSMD1Q96PZ7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CSMD1Q96PZ7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CSMD1Q96PZ7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CSMD1Q96PZ7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSMD1Q96PZ7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSMD1Q96PZ7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSMD1Q96PZ7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.26■□□□□ 0.51
CSMD1Q96PZ7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.26■□□□□ 0.51
CSMD1Q96PZ7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms