Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PRICKLE1Q96MT3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.06■■□□□ 1.12
PRICKLE1Q96MT3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PRICKLE1Q96MT3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PRICKLE1Q96MT3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PRICKLE1Q96MT3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.06■■□□□ 1.12
PRICKLE1Q96MT3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PRICKLE1Q96MT3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PRICKLE1Q96MT3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.06■■□□□ 1.12
PRICKLE1Q96MT3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.05■■□□□ 1.12
PRICKLE1Q96MT3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PRICKLE1Q96MT3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PRICKLE1Q96MT3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PRICKLE1Q96MT3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PRICKLE1Q96MT3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
PRICKLE1Q96MT3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PRICKLE1Q96MT3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
PRICKLE1Q96MT3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.05■■□□□ 1.12
PRICKLE1Q96MT3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.05■■□□□ 1.12
PRICKLE1Q96MT3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.05■■□□□ 1.12
PRICKLE1Q96MT3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.05■■□□□ 1.12
PRICKLE1Q96MT3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PRICKLE1Q96MT3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.05■■□□□ 1.12
PRICKLE1Q96MT3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.05■■□□□ 1.12
PRICKLE1Q96MT3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PRICKLE1Q96MT3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.05■■□□□ 1.12
PRICKLE1Q96MT3 LINC00565-201ENST00000562710 2331 ntBASIC22.05■■□□□ 1.12
PRICKLE1Q96MT3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PRICKLE1Q96MT3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.04■■□□□ 1.12
PRICKLE1Q96MT3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PRICKLE1Q96MT3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PRICKLE1Q96MT3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PRICKLE1Q96MT3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.04■■□□□ 1.12
PRICKLE1Q96MT3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.04■■□□□ 1.12
PRICKLE1Q96MT3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PRICKLE1Q96MT3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.04■■□□□ 1.12
PRICKLE1Q96MT3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PRICKLE1Q96MT3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
PRICKLE1Q96MT3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PRICKLE1Q96MT3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PRICKLE1Q96MT3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.04■■□□□ 1.12
PRICKLE1Q96MT3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.03■■□□□ 1.12
PRICKLE1Q96MT3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PRICKLE1Q96MT3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PRICKLE1Q96MT3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PRICKLE1Q96MT3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.03■■□□□ 1.12
PRICKLE1Q96MT3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.03■■□□□ 1.12
PRICKLE1Q96MT3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.03■■□□□ 1.12
PRICKLE1Q96MT3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.03■■□□□ 1.12
PRICKLE1Q96MT3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.03■■□□□ 1.12
PRICKLE1Q96MT3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.03■■□□□ 1.12
PRICKLE1Q96MT3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PRICKLE1Q96MT3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PRICKLE1Q96MT3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.03■■□□□ 1.12
PRICKLE1Q96MT3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.03■■□□□ 1.12
PRICKLE1Q96MT3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PRICKLE1Q96MT3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.03■■□□□ 1.12
PRICKLE1Q96MT3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PRICKLE1Q96MT3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
PRICKLE1Q96MT3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
PRICKLE1Q96MT3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PRICKLE1Q96MT3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.02■■□□□ 1.12
PRICKLE1Q96MT3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.02■■□□□ 1.12
PRICKLE1Q96MT3 AC233723.2-201ENST00000623798 2106 ntBASIC22.02■■□□□ 1.12
PRICKLE1Q96MT3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PRICKLE1Q96MT3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PRICKLE1Q96MT3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PRICKLE1Q96MT3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PRICKLE1Q96MT3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PRICKLE1Q96MT3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PRICKLE1Q96MT3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 AC104187.1-201ENST00000607510 612 ntBASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PRICKLE1Q96MT3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PRICKLE1Q96MT3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22■■□□□ 1.11
PRICKLE1Q96MT3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22■■□□□ 1.11
PRICKLE1Q96MT3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22■■□□□ 1.11
PRICKLE1Q96MT3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PRICKLE1Q96MT3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PRICKLE1Q96MT3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22■■□□□ 1.11
PRICKLE1Q96MT3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms