Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP3S1Q92572 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3S1Q92572 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3S1Q92572 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3S1Q92572 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP3S1Q92572 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3S1Q92572 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
AP3S1Q92572 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.78■□□□□ 0.6
AP3S1Q92572 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.78■□□□□ 0.6
AP3S1Q92572 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.78■□□□□ 0.6
AP3S1Q92572 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3S1Q92572 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP3S1Q92572 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
AP3S1Q92572 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3S1Q92572 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP3S1Q92572 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
AP3S1Q92572 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.77■□□□□ 0.6
AP3S1Q92572 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP3S1Q92572 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.77■□□□□ 0.6
AP3S1Q92572 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.77■□□□□ 0.6
AP3S1Q92572 GABARAPL3-202ENST00000624044 1851 ntBASIC18.77■□□□□ 0.6
AP3S1Q92572 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP3S1Q92572 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
AP3S1Q92572 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP3S1Q92572 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP3S1Q92572 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.77■□□□□ 0.59
AP3S1Q92572 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
AP3S1Q92572 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3S1Q92572 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.76■□□□□ 0.59
AP3S1Q92572 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AP3S1Q92572 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
AP3S1Q92572 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
AP3S1Q92572 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3S1Q92572 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3S1Q92572 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
AP3S1Q92572 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3S1Q92572 AL592293.1-201ENST00000502889 1188 ntBASIC18.76■□□□□ 0.59
AP3S1Q92572 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3S1Q92572 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
AP3S1Q92572 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3S1Q92572 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3S1Q92572 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3S1Q92572 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S1Q92572 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S1Q92572 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S1Q92572 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S1Q92572 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S1Q92572 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S1Q92572 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S1Q92572 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S1Q92572 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S1Q92572 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
AP3S1Q92572 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S1Q92572 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
AP3S1Q92572 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.75■□□□□ 0.59
AP3S1Q92572 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP3S1Q92572 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3S1Q92572 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.74■□□□□ 0.59
AP3S1Q92572 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3S1Q92572 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.74■□□□□ 0.59
AP3S1Q92572 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
AP3S1Q92572 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
AP3S1Q92572 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3S1Q92572 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP3S1Q92572 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP3S1Q92572 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.74■□□□□ 0.59
AP3S1Q92572 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP3S1Q92572 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.74■□□□□ 0.59
AP3S1Q92572 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.74■□□□□ 0.59
AP3S1Q92572 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3S1Q92572 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.73■□□□□ 0.59
AP3S1Q92572 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3S1Q92572 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.73■□□□□ 0.59
AP3S1Q92572 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3S1Q92572 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3S1Q92572 DUX4L4-201ENST00000566884 1269 ntBASIC18.73■□□□□ 0.59
AP3S1Q92572 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP3S1Q92572 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3S1Q92572 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3S1Q92572 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.73■□□□□ 0.59
AP3S1Q92572 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3S1Q92572 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3S1Q92572 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3S1Q92572 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
AP3S1Q92572 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.72■□□□□ 0.59
AP3S1Q92572 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
AP3S1Q92572 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
AP3S1Q92572 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3S1Q92572 AC138932.1-201ENST00000534164 6830 ntBASIC18.72■□□□□ 0.59
AP3S1Q92572 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3S1Q92572 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.72■□□□□ 0.59
AP3S1Q92572 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
AP3S1Q92572 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3S1Q92572 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.72■□□□□ 0.59
AP3S1Q92572 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.72■□□□□ 0.59
AP3S1Q92572 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3S1Q92572 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
AP3S1Q92572 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3S1Q92572 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.72■□□□□ 0.59
AP3S1Q92572 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms