Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC27.91■■■□□ 2.06
RTF1Q92541 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC27.91■■■□□ 2.06
RTF1Q92541 AC053503.5-201ENST00000601508 636 ntBASIC27.91■■■□□ 2.06
RTF1Q92541 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC27.91■■■□□ 2.06
RTF1Q92541 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RTF1Q92541 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RTF1Q92541 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
RTF1Q92541 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC27.9■■■□□ 2.06
RTF1Q92541 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC27.9■■■□□ 2.06
RTF1Q92541 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
RTF1Q92541 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
RTF1Q92541 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC27.9■■■□□ 2.06
RTF1Q92541 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC27.9■■■□□ 2.06
RTF1Q92541 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC27.9■■■□□ 2.06
RTF1Q92541 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC27.9■■■□□ 2.06
RTF1Q92541 MFSD11-216ENST00000590393 1141 ntBASIC27.9■■■□□ 2.06
RTF1Q92541 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
RTF1Q92541 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
RTF1Q92541 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC27.89■■■□□ 2.06
RTF1Q92541 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
RTF1Q92541 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC27.89■■■□□ 2.06
RTF1Q92541 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC27.89■■■□□ 2.06
RTF1Q92541 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
RTF1Q92541 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC27.89■■■□□ 2.06
RTF1Q92541 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC27.89■■■□□ 2.06
RTF1Q92541 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC27.89■■■□□ 2.06
RTF1Q92541 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.06
RTF1Q92541 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC27.89■■■□□ 2.06
RTF1Q92541 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC27.89■■■□□ 2.06
RTF1Q92541 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC27.89■■■□□ 2.06
RTF1Q92541 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
RTF1Q92541 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
RTF1Q92541 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC27.89■■■□□ 2.06
RTF1Q92541 AC092053.2-201ENST00000640557 1818 ntBASIC27.89■■■□□ 2.06
RTF1Q92541 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC27.89■■■□□ 2.05
RTF1Q92541 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC27.89■■■□□ 2.05
RTF1Q92541 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
RTF1Q92541 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
RTF1Q92541 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
RTF1Q92541 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC27.88■■■□□ 2.05
RTF1Q92541 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
RTF1Q92541 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
RTF1Q92541 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
RTF1Q92541 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
RTF1Q92541 KRT18P20-201ENST00000548986 1279 ntBASIC27.87■■■□□ 2.05
RTF1Q92541 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC27.87■■■□□ 2.05
RTF1Q92541 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC27.87■■■□□ 2.05
RTF1Q92541 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
RTF1Q92541 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC27.87■■■□□ 2.05
RTF1Q92541 MDK-213ENST00000617138 635 ntTSL 2 BASIC27.87■■■□□ 2.05
RTF1Q92541 MYCNOS-205ENST00000641950 531 ntBASIC27.87■■■□□ 2.05
RTF1Q92541 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
RTF1Q92541 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC27.87■■■□□ 2.05
RTF1Q92541 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
RTF1Q92541 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
RTF1Q92541 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
RTF1Q92541 ID1-201ENST00000376105 1233 ntBASIC27.86■■■□□ 2.05
RTF1Q92541 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
RTF1Q92541 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
RTF1Q92541 TK2-208ENST00000545043 1120 ntTSL 2 BASIC27.86■■■□□ 2.05
RTF1Q92541 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC27.86■■■□□ 2.05
RTF1Q92541 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC27.86■■■□□ 2.05
RTF1Q92541 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC27.86■■■□□ 2.05
RTF1Q92541 TFG-210ENST00000620299 1289 ntTSL 5 BASIC27.86■■■□□ 2.05
RTF1Q92541 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC27.86■■■□□ 2.05
RTF1Q92541 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
RTF1Q92541 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC27.86■■■□□ 2.05
RTF1Q92541 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
RTF1Q92541 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
RTF1Q92541 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC27.85■■■□□ 2.05
RTF1Q92541 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
RTF1Q92541 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC27.85■■■□□ 2.05
RTF1Q92541 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
RTF1Q92541 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC27.85■■■□□ 2.05
RTF1Q92541 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
RTF1Q92541 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC27.85■■■□□ 2.05
RTF1Q92541 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
RTF1Q92541 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC27.85■■■□□ 2.05
RTF1Q92541 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC27.84■■■□□ 2.05
RTF1Q92541 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC27.84■■■□□ 2.05
RTF1Q92541 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC27.84■■■□□ 2.05
RTF1Q92541 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RTF1Q92541 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC27.84■■■□□ 2.05
RTF1Q92541 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RTF1Q92541 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC27.84■■■□□ 2.05
RTF1Q92541 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC27.84■■■□□ 2.05
RTF1Q92541 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
RTF1Q92541 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC27.84■■■□□ 2.05
RTF1Q92541 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC27.84■■■□□ 2.05
RTF1Q92541 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC27.84■■■□□ 2.05
RTF1Q92541 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
RTF1Q92541 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC27.84■■■□□ 2.05
RTF1Q92541 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC27.84■■■□□ 2.05
RTF1Q92541 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
RTF1Q92541 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RTF1Q92541 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RTF1Q92541 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
RTF1Q92541 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RTF1Q92541 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC27.83■■■□□ 2.05
RTF1Q92541 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms