Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 AC004687.1-201ENST00000579003 1625 ntBASIC16.74■□□□□ 0.27
MBD3L1Q8WWY6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L1Q8WWY6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.73■□□□□ 0.27
MBD3L1Q8WWY6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.73■□□□□ 0.27
MBD3L1Q8WWY6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.73■□□□□ 0.27
MBD3L1Q8WWY6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L1Q8WWY6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.73■□□□□ 0.27
MBD3L1Q8WWY6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
MBD3L1Q8WWY6 DUX4L9-201ENST00000449051 1259 ntBASIC16.73■□□□□ 0.27
MBD3L1Q8WWY6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L1Q8WWY6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L1Q8WWY6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L1Q8WWY6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.73■□□□□ 0.27
MBD3L1Q8WWY6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 AC073314.1-201ENST00000568729 2216 ntBASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 AC120024.1-201ENST00000562672 995 ntBASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 AC019171.1-201ENST00000601251 1056 ntBASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 AFG3L1P-217ENST00000557444 2447 ntBASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L1Q8WWY6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L1Q8WWY6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
MBD3L1Q8WWY6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L1Q8WWY6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L1Q8WWY6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L1Q8WWY6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
MBD3L1Q8WWY6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
MBD3L1Q8WWY6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.71■□□□□ 0.27
MBD3L1Q8WWY6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L1Q8WWY6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L1Q8WWY6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L1Q8WWY6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.71■□□□□ 0.27
MBD3L1Q8WWY6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L1Q8WWY6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L1Q8WWY6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L1Q8WWY6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L1Q8WWY6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.71■□□□□ 0.27
MBD3L1Q8WWY6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.71■□□□□ 0.26
MBD3L1Q8WWY6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.71■□□□□ 0.26
MBD3L1Q8WWY6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.71■□□□□ 0.26
MBD3L1Q8WWY6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms